Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AC_000002.1 Length=34446 Score E Sequences producing significant alignments: (Bits) Value seq70663 102 2e-17 >seq70663 Length=227 Score = 102 bits (112), Expect = 2e-17 Identities = 138/188 (73%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 5749 TGGTCAGAAAAGACAGTGACTCTGTTGTCTAGCTTAGTGGCAAAGCTGCCATACAGGGCA 5808 ||||||||||||||| | || | |||| ||||| |||||||| | || || ||||| Sbjct 45 TGGTCAGAAAAGACAAT--CTTTTGTGTCAAGCTTGGTGGCAAA-CGCCCGTAGAGGGCG 101 Query 5809 TTGGACAGCAGTTTGGCAATGCTTCTGAGAGTTTGGTTTTTCTCTTTATCCGCCCTTTCC 5868 |||||||||| ||||| ||| | || ||||||||||| | ||| || | ||| Sbjct 102 TTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTT-GCGCGATCGGCGCGCTCC 160 Query 5869 TTGGGCGCAATGTTAAGTTGCACGTAGTCTCTAGCCAGACACTCCCACTGGGGAAATACT 5928 |||| ||| ||||| || |||||||| || | || | ||| ||| | ||||| || Sbjct 161 TTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGAA--ACG 218 Query 5929 GTGGTGCG 5936 |||||||| Sbjct 219 GTGGTGCG 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109730617005328