Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AC_000006.1 Length=35100 Score E Sequences producing significant alignments: (Bits) Value seq70663 206 6e-49 seq73759 122 2e-23 >seq70663 Length=227 Score = 206 bits (228), Expect = 6e-49 Identities = 168/198 (85%), Gaps = 7/198 (4%) Strand=Plus/Plus Query 5998 CATCCATC-TGGTCAGAAAAGACTAtttttttATTGTCAAGCTTGGTGGCAAAGGAGCCA 6056 |||||||| |||||||||||||| || |||| ||||||||||||||||||| | || Sbjct 36 CATCCATCGTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGC-CCG 92 Query 6057 TAGAGGGCGTTGGAGAGAAGCTTGGCGATGGATCTCATGGTCTGATTTTTGTCACGGTCG 6116 |||||||||||||| || | |||||||||||| | || ||| || |||||| | || ||| Sbjct 93 TAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTTG-CGCGATCG 151 Query 6117 GCGCGCTCCTTGGCCGCGATGTTGAGCTGGACATATTCGCGCGCGACACACTTCCATTCG 6176 ||||||||||||||||||||||| ||||| || ||||||||||| || ||| ||||||| Sbjct 152 GCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCG 211 Query 6177 GGAAAGACGGTGGTGCGC 6194 |||| |||||||||||| Sbjct 212 GGAA--ACGGTGGTGCGC 227 >seq73759 Length=212 Score = 122 bits (134), Expect = 2e-23 Identities = 90/105 (86%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 6437 CTGCCACTCGCGGGCGGCCATTGCTCGCTCGTAGGGGTTGAGGGGCGGACCCCACGGCAT 6496 |||||| |||||||||| | || |||||||| |||||||| || |||||||| ||||| Sbjct 60 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 119 Query 6497 GGGATGCGTGAGGGCGGAGGCGTACATGCCGCAAATGTCGTAAAC 6541 ||| || ||||| |||||||||||||||||||||||||| |||| Sbjct 120 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAAC 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111816289625692