Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AC_000008.1 Length=35938 Score E Sequences producing significant alignments: (Bits) Value seq70663 347 3e-91 seq73759 331 2e-86 >seq70663 Length=227 Score = 347 bits (384), Expect = 3e-91 Identities = 220/230 (96%), Gaps = 9/230 (4%) Strand=Plus/Plus Query 6173 TGGCCCGCGGTG-ATGCCTTTGAGGGTGGCCGCATCCATC-TGGTCAGAAAAGACAATCT 6230 |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 5 TGGCCCGCGGTGGATGCCTTTGAGGGTG-CCGCATCCATCGTGGTCAGAAAAGACAATCT 63 Query 6231 TTTTGTTGTCAAGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGA 6290 ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 64 TTTG--TGTCAAGCTTGGTGGCAAACG-CCCGTAGAGGGCGTTGGACAGCAACTTGGCGA 120 Query 6291 TGGAGCGCAGGGTTTGGTTTTTGTCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCT 6350 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 121 TGGAGCGCAGGGTTTGGTTTTTG-CGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCT 179 Query 6351 GCACGTATTCGCGCGCAACGCACCGCCATTCGGGAAAGACGGTGGTGCGC 6400 |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 180 GCACGTATTCGCGCGCAACGCACCGCCATTCGGGAA--ACGGTGGTGCGC 227 >seq73759 Length=212 Score = 331 bits (366), Expect = 2e-86 Identities = 205/214 (96%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 6583 CCCGGGCAGCAGGCGCGCGTCGAAGTAGTCTATCTTGCATCCTTGCAAGTCTAGCGCCTG 6642 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 CCCGGGCAGCAGGCGCGCGTCGAAGTAGTCTATCTTGCATCCTTGCA-GTCTAGCGCCTG 59 Query 6643 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 6702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 60 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 119 Query 6703 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCT 6762 ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct 120 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGTGAGGGGGCTCTCT 179 Query 6763 -GAGTATTCCAA-GATATGTAGGGTAGCATCTTC 6794 ||||||||||| |||||| |||||||||||||| Sbjct 180 GGAGTATTCCAAGGATATG-AGGGTAGCATCTTC 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114488756989400