Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AC_000009.1 Length=32621 Score E Sequences producing significant alignments: (Bits) Value seq70663 84.2 5e-12 >seq70663 Length=227 Score = 84.2 bits (92), Expect = 5e-12 Identities = 134/188 (71%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 5303 TGGTCAGAAAACACTAtttttttGTTGTCTAATCTGGTGGCGAACGATCCGTACAGTGCG 5362 ||||||||||| || || |||| |||| | ||||||| |||| ||||| || ||| Sbjct 45 TGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGC-CCGTAGAGGGCG 101 Query 5363 TTTGATAAAAGTTTGGCAATGCTTCGCATGGTTTGGTTCTTTTCCCTGTCTGCCTTTTCC 5422 || || | | ||||| ||| |||| ||||||||| ||| | | || || ||| Sbjct 102 TTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTT-TTTGCGCGATCGGCGCGCTCC 160 Query 5423 TTTGCTGCGATGTTCAGCTGCACGTACTCTTTGGCCAAGCATTTCCATTCCGGGAAAATG 5482 || || |||||||| ||||||||||| || || | ||| |||||| || ||| | Sbjct 161 TTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTC--GGGAAACG 218 Query 5483 GTAGTGCG 5490 || ||||| Sbjct 219 GTGGTGCG 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103910506099878