Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AC_000010.1 Length=35524 Score E Sequences producing significant alignments: (Bits) Value seq70663 154 3e-33 seq73759 107 4e-19 >seq70663 Length=227 Score = 154 bits (170), Expect = 3e-33 Identities = 143/176 (81%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 6090 TGGTCAGAAAAGACAATTTTCTTGTTGTCAAGCTTGGTGGCAAAGGATCCGTATAGGGCA 6149 ||||||||||||||||| || |||| |||||||||||||||||| | ||||| ||||| Sbjct 45 TGGTCAGAAAAGACAATCTT-TTGT-GTCAAGCTTGGTGGCAAACGC-CCGTAGAGGGCG 101 Query 6150 TTGGATAAAAGCTTGGCGATGGAGCGCATGGTTTGGTTCTTATCCTTGTCCGCACGCTCC 6209 ||||| | | ||||||||||||||||| ||||||||| || | || || |||||| Sbjct 102 TTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTTGCGCGA-TCGGCGCGCTCC 160 Query 6210 TTGGCAGCAATGTTGAGTTGGACGTACTCGCGCGCCAGGCACTTCCATTCAGGAAA 6265 ||||| || ||||| || || ||||| |||||||| | |||| |||||| ||||| Sbjct 161 TTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGAAA 216 >seq73759 Length=212 Score = 107 bits (118), Expect = 4e-19 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 6518 CTGCCATTCTCGAGCTGCCAGCGCGCGTTCATAGGGATTGAGTGGGGTGCCCCATGGCAT 6577 ||||||| | || || || |||||||| || || || |||||||||| ||||||||||| Sbjct 60 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 119 Query 6578 GGGGTGGGTGAGTGCAGAGGCATACATGCCACAGATGTC 6616 |||||||||||| || ||||| |||||||| || ||||| Sbjct 120 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTC 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113168468816876