Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= AC_000010.1
Length=35524
Score E
Sequences producing significant alignments: (Bits) Value
seq70663 154 3e-33
seq73759 107 4e-19
>seq70663
Length=227
Score = 154 bits (170), Expect = 3e-33
Identities = 143/176 (81%), Gaps = 4/176 (2%)
Strand=Plus/Plus
Query 6090 TGGTCAGAAAAGACAATTTTCTTGTTGTCAAGCTTGGTGGCAAAGGATCCGTATAGGGCA 6149
||||||||||||||||| || |||| |||||||||||||||||| | ||||| |||||
Sbjct 45 TGGTCAGAAAAGACAATCTT-TTGT-GTCAAGCTTGGTGGCAAACGC-CCGTAGAGGGCG 101
Query 6150 TTGGATAAAAGCTTGGCGATGGAGCGCATGGTTTGGTTCTTATCCTTGTCCGCACGCTCC 6209
||||| | | ||||||||||||||||| ||||||||| || | || || ||||||
Sbjct 102 TTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTTGCGCGA-TCGGCGCGCTCC 160
Query 6210 TTGGCAGCAATGTTGAGTTGGACGTACTCGCGCGCCAGGCACTTCCATTCAGGAAA 6265
||||| || ||||| || || ||||| |||||||| | |||| |||||| |||||
Sbjct 161 TTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGAAA 216
>seq73759
Length=212
Score = 107 bits (118), Expect = 4e-19
Identities = 83/99 (84%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 6518 CTGCCATTCTCGAGCTGCCAGCGCGCGTTCATAGGGATTGAGTGGGGTGCCCCATGGCAT 6577
||||||| | || || || |||||||| || || || |||||||||| |||||||||||
Sbjct 60 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 119
Query 6578 GGGGTGGGTGAGTGCAGAGGCATACATGCCACAGATGTC 6616
|||||||||||| || ||||| |||||||| || |||||
Sbjct 120 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTC 158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113168468816876
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |