Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AC_000011.1 Length=36519 Score E Sequences producing significant alignments: (Bits) Value seq70663 201 3e-47 seq73759 116 9e-22 >seq70663 Length=227 Score = 201 bits (222), Expect = 3e-47 Identities = 184/224 (82%), Gaps = 9/224 (4%) Strand=Plus/Plus Query 6056 GCCGGCGGAG-ATGCCTTTCAAGAGCCCCTCGTCCATC-TGGTCAGAAAAGACGATCTTT 6113 ||| |||| | |||||||| | | | || | |||||| |||||||||||||| |||||| Sbjct 7 GCCCGCGGTGGATGCCTTTGAGG-GTGCCGCATCCATCGTGGTCAGAAAAGACAATCTTT 65 Query 6114 TTGTTGTCGAGCTTGGTGGCGAAGGAGCCGTAGAGGGCGTTGGAGAGGAGCTTGGCGATG 6173 | |||| ||||||||||| || | ||||||||||||||||| || | |||||||||| Sbjct 66 TG--TGTCAAGCTTGGTGGCAAACGC-CCGTAGAGGGCGTTGGACAGCAACTTGGCGATG 122 Query 6174 GAGCGCATGGTCTGGtttttttCCTTGTCGGCGCGCTCCTTGGCGGCGATGTTGAGCTGC 6233 ||||||| ||| |||||||| | ||||||||||||||||| |||||||| |||||| Sbjct 123 GAGCGCAGGGTTTGGTTTTTGCGCGA-TCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGC 181 Query 6234 ACGTACTCGCGCGCCACGCACTTCCATTCGGGGAAGACGGTGGT 6277 ||||| |||||||| |||||| ||||||||| | |||||||| Sbjct 182 ACGTATTCGCGCGCAACGCACCGCCATTCGGG--AAACGGTGGT 223 >seq73759 Length=212 Score = 116 bits (128), Expect = 9e-22 Identities = 104/129 (81%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 6525 TGCCATTCGCGCACGGCCAGCGCGCGCTCGTAGGGACTGAGGGGCGTGCCCCAGGGCATG 6584 |||||| |||| |||| |||||||||||||| || |||| || | ||||| |||||| Sbjct 61 TGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATG 120 Query 6585 GGATGGGTAAGCGCGGAGGCGTACATGCCGCAGATGTCGTAGACGTAGAGGGGCTC-CTC 6643 || ||||| ||||||||||||||||||||||| ||||| | |||| ||||||| || Sbjct 121 GGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGTGAGGGGGCTCTCTG 180 Query 6644 GAGGATGCC 6652 ||| || || Sbjct 181 GAGTATTCC 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116341625173546