Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AC_000017.1 Length=36001 Score E Sequences producing significant alignments: (Bits) Value seq70663 342 1e-89 seq73759 313 6e-81 >seq70663 Length=227 Score = 342 bits (378), Expect = 1e-89 Identities = 219/230 (95%), Gaps = 9/230 (4%) Strand=Plus/Plus Query 6184 TGGCCCGCGGTG-ATGCCTTTGAGGGTGGCCGCGTCCATC-TGGTCAGAAAAGACAATCT 6241 |||||||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||| Sbjct 5 TGGCCCGCGGTGGATGCCTTTGAGGGTG-CCGCATCCATCGTGGTCAGAAAAGACAATCT 63 Query 6242 TTTTGTTGTCAAGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGA 6301 ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 64 TTTG--TGTCAAGCTTGGTGGCAAACG-CCCGTAGAGGGCGTTGGACAGCAACTTGGCGA 120 Query 6302 TGGAGCGCAGGGTTTGGTTTTTGTCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCT 6361 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 121 TGGAGCGCAGGGTTTGGTTTTTG-CGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCT 179 Query 6362 GCACGTATTCGCGCGCAACGCACCGCCATTCGGGAAAGACGGTGGTGCGC 6411 |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 180 GCACGTATTCGCGCGCAACGCACCGCCATTCGGGAA--ACGGTGGTGCGC 227 >seq73759 Length=212 Score = 313 bits (346), Expect = 6e-81 Identities = 201/214 (94%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 6594 CCCGGGCAACAGGCGCGCGTCGAAGTAGTCTATCTTGCATCCTTGCAAGTCTAACGCCTG 6653 |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 1 CCCGGGCAGCAGGCGCGCGTCGAAGTAGTCTATCTTGCATCCTTGCA-GTCTAGCGCCTG 59 Query 6654 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 6713 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 60 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 119 Query 6714 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAGATGTCGTAAACGTAGAGGGGCTCCCT 6773 ||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| || Sbjct 120 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGTGAGGGGGCTCTCT 179 Query 6774 -GAGTATTCCAA-GATATGTAGGGTAGCATCTTC 6805 ||||||||||| |||||| |||||||||||||| Sbjct 180 GGAGTATTCCAAGGATATG-AGGGTAGCATCTTC 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114689670406958