Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AC_000018.1 Length=35514 Score E Sequences producing significant alignments: (Bits) Value seq70663 165 2e-36 seq73759 105 2e-18 >seq70663 Length=227 Score = 165 bits (182), Expect = 2e-36 Identities = 151/183 (83%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 6062 TCCATC-TGGTCAGAAAACACAATCTTCTTGTTGTCCAGCTTGGTAGCAAATGATCCATA 6120 |||||| ||||||||||| |||||||| |||| ||| |||||||| ||||| | || || Sbjct 38 TCCATCGTGGTCAGAAAAGACAATCTT-TTGT-GTCAAGCTTGGTGGCAAACGC-CCGTA 94 Query 6121 GAGGGCATTGGATAGAAGCTTGGCGATGGAGCGCATGGTTTGGTTCTTTTCCTTGTCCGC 6180 |||||| ||||| || | ||||||||||||||||| ||||||||| ||| | || || Sbjct 95 GAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTT-TTTGCGCGATCGGC 153 Query 6181 GCGCTCCTTGGCGGCGATGTTAAGCTGGACGTACTCGCGCGCCACACATTTCCATTCAGG 6240 |||||||||||| |||||||| ||||| ||||| |||||||| || || |||||| || Sbjct 154 GCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTC-GG 212 Query 6241 GAA 6243 ||| Sbjct 213 GAA 215 >seq73759 Length=212 Score = 105 bits (116), Expect = 2e-18 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 6496 CTGCCATTCTCGAACTGCCAGCGCGCGCTCATAGGGGTTAAGAGGGGTGCCCCAGGGCAT 6555 ||||||| | || | || ||||||||||| || ||||| || |||| ||||| ||||| Sbjct 60 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 119 Query 6556 GGGGTGGGTGAGCGCGGAGGCATACATGCCACAGATATCGTATACATAGAGGGGCTCT 6613 ||||||||||||||||||||| |||||||| || || || | || | |||||||| Sbjct 120 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGTGAGGGGGCTCT 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113136577798216