Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AC_000019.1 Length=34794 Score E Sequences producing significant alignments: (Bits) Value seq70663 134 3e-27 >seq70663 Length=227 Score = 134 bits (148), Expect = 3e-27 Identities = 158/207 (76%), Gaps = 10/207 (5%) Strand=Plus/Plus Query 6056 GATGCCTTTCATGAGGTTTTCG--TCCATT-TGGTCAGAAAACACAAtttttttATTGTC 6112 ||||||||| |||| | || ||||| ||||||||||| ||||| |||| |||| Sbjct 17 GATGCCTTT---GAGGGTGCCGCATCCATCGTGGTCAGAAAAGACAATCTTTTG--TGTC 71 Query 6113 AAGTTTGGTGGCAAATGATCCATACAGGGCGTTGGATAAAAGTTTGGCAATGGATCGCAT 6172 ||| ||||||||||| | || || ||||||||||| | | ||||| ||||| |||| Sbjct 72 AAGCTTGGTGGCAAACGC-CCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAG 130 Query 6173 GGTTTGGTTCTTTTCCTTGTCCGCGCGCTCTTTGGCGGCGATGTTGAGTTGGACATACTC 6232 ||||||||| ||| | || |||||||| ||||| |||||||| || || || || || Sbjct 131 GGTTTGGTT-TTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTC 189 Query 6233 GCGTGCCAGGCACTTCCATTCGGGGAA 6259 ||| || | |||| ||||||||| || Sbjct 190 GCGCGCAACGCACCGCCATTCGGGAAA 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110840424454696