Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AC_000189.1 Length=34094 Score E Sequences producing significant alignments: (Bits) Value seq70663 123 5e-24 >seq70663 Length=227 Score = 123 bits (136), Expect = 5e-24 Identities = 159/213 (75%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 6211 CCGCGGGCGATGGCTTCGGTGGTGCGGGCGTCCATC-TGGCTGGCGAAGACCACCTTCTT 6269 |||||| |||| ||| | ||||| | | |||||| ||| | ||||| | ||| | Sbjct 9 CCGCGGTGGATGCCTTTGAGGGTGCCG-CATCCATCGTGGTCAGAAAAGACAATCTTTTG 67 Query 6270 ATTGTCGAGGCGTGTGGCGAAACTGCCGTAGAGGGCGTTGGAGAGAAGCTTGGCGATGCT 6329 |||| || ||||| |||| ||||||||||||||||| || | |||||||||| Sbjct 68 --TGTCAAGCTTGGTGGC-AAACGCCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGA 124 Query 6330 GCGGAGCGTTTGGTTTCTGTCCCGGTCGGCCTTTTCCTTGGCAGCGATGTTGAGCTGCAC 6389 ||| || ||||||||| || | || ||||| |||||||| |||||||| |||||||| Sbjct 125 GCGCAGGGTTTGGTTTTTG-CGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCAC 183 Query 6390 GTAGTCTCGGGCGAGGCAGCGCCACTCGGGGAA 6422 ||| || || || | ||| ||||| ||||| || Sbjct 184 GTATTCGCGCGCAACGCACCGCCATTCGGGAAA 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108608053148496