Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AC_000190.1 Length=33501 Score E Sequences producing significant alignments: (Bits) Value seq70663 95.1 3e-15 >seq70663 Length=227 Score = 95.1 bits (104), Expect = 3e-15 Identities = 126/170 (74%), Gaps = 5/170 (3%) Strand=Plus/Plus Query 5103 TTTTGTTGTCTAGTTTGGTGGCAAACGAGCCGTACAGAGCGTTGGACAAGAGTTTAGCGA 5162 |||||| ||| || ||||||||||||| ||||| || |||||||||| | || |||| Sbjct 63 TTTTGT-GTCAAGCTTGGTGGCAAACGC-CCGTAGAGGGCGTTGGACAGCAACTTGGCGA 120 Query 5163 TGCTGCGGATGGTTTGAtttttttCCTTGTCTGCCTTTTCCTTGGCCGCAATGTTTAGTT 5222 || ||| | |||||| ||||| | || || ||||||||||| |||||||| | Sbjct 121 TGGAGCGCAGGGTTTGGTTTTTGCGCGA-TCGGCGCGCTCCTTGGCCGCGATGTTTAGCT 179 Query 5223 TGACATACTCTTGAGCGATGCATTTCCATTCGGGAAAAACGGTGGTGCGC 5272 || || || | || | ||| ||||||||| |||||||||||||| Sbjct 180 GCACGTATTCGCGCGCAACGCACCGCCATTCGGG--AAACGGTGGTGCGC 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 106716915741958