Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AC_000191.1 Length=34185 Score E Sequences producing significant alignments: (Bits) Value seq70663 82.4 2e-11 >seq70663 Length=227 Score = 82.4 bits (90), Expect = 2e-11 Identities = 126/176 (72%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 6282 TGGTCAGAAAACACTAtttttttGTTATCGAGTTTAGTAGCAAAGCTGCCGTACAGAGCA 6341 ||||||||||| || || |||| | || || || || ||||| | ||||| || || Sbjct 45 TGGTCAGAAAAGACAATCTTTT--GTGTCAAGCTTGGTGGCAAA-CGCCCGTAGAGGGCG 101 Query 6342 TTTGACAACAGTTTGGCTATGCTGCGCAttgtttggtttttgtttttgtctgctttttct 6401 || |||| || ||||| ||| ||||| |||||||||||| || || || Sbjct 102 TTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTTG-CGCGATCGGCGCGCTCC 160 Query 6402 ttgGCGGCTATGTTCAGCTGGACATATTCTTTAGCCACGCAACGCCATTCTGGAAA 6457 ||||| || ||||| ||||| || ||||| || ||||| |||||||| ||||| Sbjct 161 TTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGAAA 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108898261418302