Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1255 96.9 3e-15 >seq1255 Length=321945 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 19061 GGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCA 19120 ||| ||||| || || ||||||||||| | ||| || |||| || ||||| | || || Sbjct 281940 GGGTCTTGGTGTTCCTTTCAACATTGCCAGTTATTCATTTCTGACATACATGATTGCCCA 281881 Query 19121 TGTTACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTT 19180 | | ||||| | || | |||||||| | ||||| || || ||||| ||| ||||||| Sbjct 281880 TATAACAGGTTTGAAGCCAGGAGATTTCGTACATACTATTGGAGATGCCCATGTTTACTT 281821 Query 19181 GAATCATATAGATGCTTTAAAAGTGCAGCTA 19211 || || || |||||||| ||| | ||| || Sbjct 281820 AAACCACATTGATGCTTTGAAAATACAGGTA 281790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398107617788685