Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1267 111 1e-19
seq4435 102 7e-17
seq629 102 7e-17
>seq1267
Length=316221
Score = 111 bits (122), Expect = 1e-19
Identities = 168/238 (71%), Gaps = 1/238 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| || || | ||||||||| | || | ||||| |||||||||||||| || || |
Sbjct 206431 CCCCCACGGAGTCTCAACACTAGATGAAGAGTAGATTCTTTTTGAATGTTATAGTCTGAC 206490
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||||| |||||| | |||||||||||| | || | | ||| || || || ||
Sbjct 206491 AATGTGCGACCATCCTCCAACTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGA 206550
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| || || |||||| |||||| || || | ||| | |||||| | ||| ||
Sbjct 206551 ATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTTTCAATGGTGTCACTAGGCTCCACT 206610
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTATTCTA 118749
|| | || | ||||| || || || ||||||||||| |||||||| |||| ||||
Sbjct 206611 TCCAGAGTGATAGTTTTTCCTGTTAGCGTTTTTACAAAGATCTGCAT-CCTTAATCTA 206667
Score = 102 bits (112), Expect = 7e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583
|||| ||| ||||| | ||| |||||||||||||| |||||||| | ||| | |
Sbjct 206215 CTCAGCACTAAGTGAAGTGTTGACTCTTTTTGAATATTGTAATCAGATAAAGTTCTTCCA 206274
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
|| || | ||| ||||| || | || | | |||||| || ||||| || || || |||
Sbjct 206275 TCTTCCAACTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGAGGGATTCCTTCTTTG 206334
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
||| || || || || | ||| | ||||| || || || || | ||| |
Sbjct 206335 TCTTGGATCTTAGCCTTCACATTTTCAATTGTGTCACTGGGTTCAACTTCTAGGGTAATG 206394
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||||||||| || ||||| ||||| |||||||||
Sbjct 206395 GTTTTGCCGGTAAGGGTTTTCACAAAGATCTGCATG 206430
Score = 93.3 bits (102), Expect = 4e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583
|||| ||| ||||| | ||| |||||||||||||| |||||||| | ||| | |
Sbjct 205987 CTCAGCACTAAGTGAAGTGTTGACTCTTTTTGAATATTGTAATCAGATAAAGTTCTTCCA 206046
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
|| || | ||| ||||| || | || | | ||||| || ||||| || ||||| ||
Sbjct 206047 TCTTCCAACTGCTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGAGGGATCCCCTCTTTA 206106
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCAC 118702
|| ||||| || || | ||| | ||||| | || | || || || | ||| |
Sbjct 206107 TCCTGGATTTTAGCCTTTACGTTTTCAATAGTGTCACTTGGT-TCAACTTCCAGGGTGAT 206165
Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||||| || |||||||| || ||||| ||||||||| ||
Sbjct 206166 AGTTTTACCTGTCAGAGTCTTAACAAAGATCTGCATGCCT 206205
>seq4435
Length=89394
Score = 102 bits (112), Expect = 7e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583
|||| || ||||| | |||||||||||| || ||||| ||||| || ||| | | |
Sbjct 36487 CTCAGGACTAAGTGAAGTGTAGACTCTTTCTGGATGTTATAATCTGACAGAGTTCTCCCA 36428
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
|| || | ||||||||| || |||| | | ||| || || || || || || || ||
Sbjct 36427 TCTTCTAACTGTTTTCCTGCAAAGATTAACCTCTGTTGGTCTGGTGGAATTCCTTCTTTA 36368
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
|| |||||| ||| || | ||| | ||||| || || || |||| ||| |
Sbjct 36367 TCCTGGATTTTTGCTTTCACATTTTCAATAGTGTCACTGGGTTCAACTTCGAGGGTTATA 36308
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| ||||| || |||||||| || || |||||||||
Sbjct 36307 GTCTTGCCTGTAAGAGTTTTGACGAAGATCTGCATG 36272
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | ||||| |||||||| | || || ||||| |||||||||||||| |
Sbjct 36727 CCTCCACGCAGTCTCAGTACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCTGAC 36668
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || | ||| || | || || ||||| | || | | || || || |||||
Sbjct 36667 AGGGTTCTTCCATCTTCCAATTGCTTCCCAGCAAAAATTAACCTTTGTTGGTCTGGAGGG 36608
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| |||||||| ||| ||| || ||| || | ||||| || || || || |||
Sbjct 36607 ATTCCCTCCTTATCTTGAATCTTAGCTTTCACATTTTCGATTGTATCACTGGGTTCTACC 36548
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| || |||||||| || |||||||| |||||
Sbjct 36547 TCAAGGGTGATGGTTTTTCCTGTCAGAGTCTTAACAAAAATTTGCAT 36501
>seq629
Length=499154
Score = 102 bits (112), Expect = 7e-17
Identities = 143/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599
|||||||| |||||||||||||||| || | |||| ||| |||||| || ||||| |
Sbjct 6162 GTAGACTCCTTTTGAATGTTGTAAT--CTGAGAGTGTACGTCCATCCTCTAGTTGTTTAC 6105
Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659
|||| |||| || | ||| || || || || ||||| ||||||||| || ||| ||
Sbjct 6104 CAGCAAAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTTGCTT 6045
Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719
| || | || | ||||| | ||| || || | || | ||||| || || || |
Sbjct 6044 TTACATTCTCTATTGTGTCACTTGGCTCCACTTCCAAAGTGATGGTTTTTCCAGTGAGGG 5985
Query 118720 TTTTTACAAAAATCTGCAT 118738
| || |||||||| |||||
Sbjct 5984 TCTTCACAAAAATTTGCAT 5966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 432314037076756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |