Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq9501 113 8e-20
seq994 89.7 9e-13
>seq9501
Length=22347
Score = 113 bits (124), Expect = 8e-20
Identities = 233/344 (68%), Gaps = 2/344 (1%)
Strand=Plus/Minus
Query 135600 AGATAAAGACGAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATAGAACT 135659
|||| |||| || |||| || ||| ||||||| || || || |||||||| || ||
Sbjct 15113 AGATGAAGATGAATGGAGAACTTGGCAAAAAATGAGTGACCCAGTGTTGCATATTGAGCT 15054
Query 135660 TAGGAGATGGGCGGATGTTTTTATTATAGCGCC-CTTAACGGCAAATACGTTAGCAAAAA 135718
|| ||||||| ||||| | | || | || ||| | | | || || | || ||||
Sbjct 15053 GAGACGATGGGCCGATGTCCTCGTGGTATCTCCTCTTGATG-CTAACACCATGGCCAAAA 14995
Query 135719 TAGCTAATGGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACA 135778
|| | ||| || || |||||| | | || | | | || || || ||||||| || |
Sbjct 14994 TAAGCAGTGGCATTTGTGATAATCTTTTAACATGTGTAGTGAGGGCATGGGATATGAAGA 14935
Query 135779 AACCACTCATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACAGAAA 135838
||||||| | || || ||||| ||||| || | ||||||||| || || || |||| |
Sbjct 14934 AACCACTGGTGTTTTGCCCTGCTATGAACACCCATATGTGGGATCACCCGATAACAGTCA 14875
Query 135839 AACATATAGATACGTTAAAATATATGGGTTTCATAGAAATAGAATGCATAGaaaaaaaaC 135898
|| || || | || ||| | | || | |||||| | || ||| || ||
Sbjct 14874 CCCAAATCGAAAAATTGAAAGAACTTGGATACATAGAGGTGCCTTGTGTAGCCAAGAAGT 14815
Query 135899 TAGCATGTGGAGACGTAGGAAATGGTGCTATGGCAGAAGTTGCA 135942
| |||||||| || || ||||||||||||| |||||| ||
Sbjct 14814 TGGCATGTGGTGATAGTGGTTATGGTGCTATGGCTGAAGTTCCA 14771
>seq994
Length=361151
Score = 89.7 bits (98), Expect = 9e-13
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 45591 TTTGTAACAGTGCACCATTTTTCAGATTTTGTATCGTAGCATCCCATAAGAAAACTGGAT 45650
||||||||||| |||||||||| | | |||||| |||||||| ||||| | ||
Sbjct 158414 TTTGTAACAGTACACCATTTTTTACTAGCAGGATCGTAACATCCCATCAGAAATATTGAC 158473
Query 45651 AAAATACCAGACTTGTTACCCTTTCCGTAATAAGCACCCAAAACTACTAGATCAGCTTTA 45710
| || ||| || || || |||| |||| || || | ||| || ||||||||| |
Sbjct 158474 ATCATTCCACCTTTATTTCCAGTTCCAAAATATGCTCCAAGAACAACAAGATCAGCTGAA 158533
Query 45711 TCCGCCATAACACATCCATCTAAGTAGTCtttttttATTTTCAGCCA 45757
|| ||||| | | | |||| ||| |||||||| ||||| |||||
Sbjct 158534 TCTGCCATTGCTCCATCTTCTAGGTAATCTTTTTTAATTTTTAGCCA 158580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 919887220251720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |