Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq10433 125 8e-24
seq3155 122 1e-22
seq629 116 4e-21
seq3613 114 1e-20
seq77675 113 5e-20
seq1598 113 5e-20
seq887 113 5e-20
seq80409 111 2e-19
seq5467 111 2e-19
seq4682 111 2e-19
seq196739 109 6e-19
seq3701 109 6e-19
seq647 109 6e-19
seq524 109 6e-19
seq4435 107 2e-18
seq1471 107 2e-18
seq8129 105 8e-18
seq256919 96.9 4e-15
seq100255 96.9 4e-15
seq14773 86.0 7e-12
seq1267 86.0 7e-12
seq263599 82.4 9e-11
>seq10433
Length=18727
Score = 125 bits (138), Expect = 8e-24
Identities = 81/89 (91%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||| |||| |||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 17111 AAATATTTACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 17170
Query 60117 TCACCACTATACTACCGAGGATTGAATAT 60145
||||||||||||||||||||| |||||||
Sbjct 17171 TCACCACTATACTACCGAGGAATGAATAT 17199
>seq3155
Length=145643
Score = 122 bits (134), Expect = 1e-22
Identities = 81/89 (91%), Gaps = 1/89 (1%)
Strand=Plus/Plus
Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115
||| |||||| ||| |||| ||||||||||||| ||||||||||||||||||||| |||
Sbjct 127522 AAATATTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 127581
Query 60116 CTCACCACTATACTACCGAGGATTGAATA 60144
|||||||||||||||||||||||| ||||
Sbjct 127582 CTCACCACTATACTACCGAGGATTAAATA 127610
>seq629
Length=499154
Score = 116 bits (128), Expect = 4e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 42972 AACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCA 43031
|| || | |||||| || |||||||||||| |||||||| | || || || | ||
Sbjct 6177 AAGACAAGATGCAAAGTAGACTCCTTTTGAATGTTGTAATCTGAGAGTGTACGTCCATCC 6118
Query 43032 TCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091
||||| || |||||||| || || |||| ||| ||||| | || | || ||||||||
Sbjct 6117 TCTAGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCT 6058
Query 43092 ATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTT 43151
||| ||| ||| | || | | ||||| || | ||||| || | |||||||||
Sbjct 6057 TGGATCTTTGCTTTTACATTCTCTATTGTGTCACTTGGCTCCACTTCCAAAGTGATGGTT 5998
Query 43152 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || || ||||| ||||| ||||||||
Sbjct 5997 TTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 5966
Score = 96.9 bits (106), Expect = 4e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|| ||||| || ||||| |||| || || || | || || || || |||||||| ||
Sbjct 5928 TCTTTTTGGATGTTGTAGTCAGAAAGTGTTCGACCATCCTCCAGTTGTTTACCAGCAAAG 5869
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| |||| ||| ||||| | || | || |||||||| ||| ||| ||| | ||
Sbjct 5868 ATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATTC 5809
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | ||||| || | ||||| || | ||||||||||| || || || ||||| |||
Sbjct 5808 TCTATTGTGTCACTTGGCTCCACTTCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTCACA 5749
Query 43173 AAGATTTGCAT 43183
|| ||||||||
Sbjct 5748 AAAATTTGCAT 5738
>seq3613
Length=121273
Score = 114 bits (126), Expect = 1e-20
Identities = 85/97 (88%), Gaps = 2/97 (2%)
Strand=Plus/Plus
Query 60053 TATGAAAAATTTT-CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 60111
|| |||||| || |||| |||| ||||||||||||| |||||||||||||||||||||
Sbjct 18386 TAAGAAAAACATTACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 18445
Query 60112 CATACTCACCACTATACTACCGAGGATTGA-ATATAT 60147
||||| ||||||||||||||||||| ||| ||||||
Sbjct 18446 GATACTTACCACTATACTACCGAGGACTGACATATAT 18482
Score = 113 bits (124), Expect = 5e-20
Identities = 71/77 (92%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 3030 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 3089
Query 60124 TATACTACCGAGGATTG 60140
|||||||||||||| ||
Sbjct 3090 TATACTACCGAGGACTG 3106
Score = 107 bits (118), Expect = 2e-18
Identities = 70/77 (91%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 1085 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 1144
Query 60124 TATACTACCGAGGATTG 60140
|||||||| ||||| ||
Sbjct 1145 TATACTACAGAGGACTG 1161
Score = 95.1 bits (104), Expect = 1e-14
Identities = 75/90 (83%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| |||| || |||||||||| ||| |||| |||||||||||| ||| |||||||
Sbjct 62 TTCTCCCCGGCGGGTAATCGAACCCCGGTTTCCCTCGTGACAGGCGGGGATATTCACCAC 121
Query 60124 TATACTACCGAGGATTGAATATATAACTTG 60153
|||||||||||||| || || ||| |||
Sbjct 122 TATACTACCGAGGACTGGTAATTTAAATTG 151
>seq77675
Length=3689
Score = 113 bits (124), Expect = 5e-20
Identities = 79/90 (88%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| |||| ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 3287 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 3346
Query 60124 TATACTACCGAGGATTGAATATATAACTTG 60153
|||||||||||||| || || ||| |||
Sbjct 3347 TATACTACCGAGGACTGGTAATTTAAATTG 3376
>seq1598
Length=271001
Score = 113 bits (124), Expect = 5e-20
Identities = 71/77 (92%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 128008 TTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCA 127949
Query 60123 CTATACTACCGAGGATT 60139
|||||||||||||||||
Sbjct 127948 CTATACTACCGAGGATT 127932
>seq887
Length=403026
Score = 113 bits (124), Expect = 5e-20
Identities = 76/85 (89%), Gaps = 4/85 (5%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| |||| ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 337300 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 337241
Query 60125 ATACTACCGAGGATTGAATATATAA 60149
||||||||||| ||||||||||
Sbjct 337240 ATACTACCGAG----GAATATATAA 337220
>seq80409
Length=1700
Score = 111 bits (122), Expect = 2e-19
Identities = 76/85 (89%), Gaps = 3/85 (4%)
Strand=Plus/Minus
Query 60056 GAAAAATTT---TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112
||||||| | ||||| |||| ||||||||||||| |||||||||||||||||||||
Sbjct 1327 GAAAAATATAACTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 1268
Query 60113 ATACTCACCACTATACTACCGAGGA 60137
|||||||||||||||||||||||||
Sbjct 1267 ATACTCACCACTATACTACCGAGGA 1243
>seq5467
Length=66102
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|||||||| || |||| |||| ||| | || |||||||| |||||||| ||||
Sbjct 29821 CCTCCTCTCAATCGCAGAACCAGATGAAGAGTTGATTCCTTTTGGATATTGTAGTCAGAA 29880
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| ||||| | || || || || ||||| || || ||||||| |||||||| | ||
Sbjct 29881 AGGGTCCGTCCATCCTCCAGTTGTTTACCTGCAAAAATGAGTCTTTGCTGGTCTGGTGGA 29940
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | || ||||| ||| |||||| ||| | || | | || || || | ||| ||
Sbjct 29941 ATACCTTCTTTGTCT-TGAATTTTTGCTTTTACATTCTCAATAGTATCACTAGGTTCTAC 29999
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | || ||||||||||| ||||| || || |||||||| |||||
Sbjct 30000 TTCCAGAGTAATGGTTTTGCCAGTTAGGGTTTTCACAAAGATCTGCAT 30047
>seq4682
Length=86729
Score = 111 bits (122), Expect = 2e-19
Identities = 70/76 (92%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 79778 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 79837
Query 60124 TATACTACCGAGGATT 60139
||||||||||||||||
Sbjct 79838 TATACTACCGAGGATT 79853
>seq196739
Length=503
Score = 109 bits (120), Expect = 6e-19
Identities = 72/80 (90%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 60060 AATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 60119
|| || |||| |||| ||||||| |||||||||||||||||||| |||||| |||||||
Sbjct 472 AACTTACTCCCCGGCGGGGAATCTAACCCTGGTCTCCCGCGTGATAGGCGGGGATACTCA 413
Query 60120 CCACTATACTACCGAGGATT 60139
||||||||||||||||||||
Sbjct 412 CCACTATACTACCGAGGATT 393
>seq3701
Length=112886
Score = 109 bits (120), Expect = 6e-19
Identities = 72/80 (90%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 60060 AATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 60119
|| || |||| |||| ||||||||||||| ||||| ||||||||||||||| |||||||
Sbjct 410 AACTTACTCCCCGGCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGGGATACTCA 351
Query 60120 CCACTATACTACCGAGGATT 60139
||||||||||||||||||||
Sbjct 350 CCACTATACTACCGAGGATT 331
>seq647
Length=489208
Score = 109 bits (120), Expect = 6e-19
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 60057 AAAAATTTT-CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115
|| ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| |||
Sbjct 135680 AATAATTTCACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 135621
Query 60116 CTCACCACTATACTACCGAGGA 60137
||||||||||||||||||||||
Sbjct 135620 CTCACCACTATACTACCGAGGA 135599
>seq524
Length=543868
Score = 109 bits (120), Expect = 6e-19
Identities = 69/75 (92%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 204761 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 204702
Query 60124 TATACTACCGAGGAT 60138
|||||||||||||||
Sbjct 204701 TATACTACCGAGGAT 204687
>seq4435
Length=89394
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
|||| ||| || || |||||| |||||||||||||| | || || || | || ||
Sbjct 36025 ACCAGATGTAAAGTAGACTCCTTCTGAATATTGTAATCTGACAAGGTACGTCCATCTTCC 35966
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
| |||||| ||||| || || | || || || || | || | | |||||| || |
Sbjct 35965 AACTGCTTTCCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATTCCCTCCTTATCTTGG 35906
Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154
||||| ||||| || | | |||||||| | || || || | ||||| || |||
Sbjct 35905 ATTTTAGCTTTGACGTTCTCTATGGTGTCGCTAGGCTCTACCTCCAAAGTGATTGTCTTG 35846
Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
|| ||||||||||||||||| || ||||||||
Sbjct 35845 CCTGTTAGCGTCTTTACAAATATCTGCATTTT 35814
>seq1471
Length=275221
Score = 107 bits (118), Expect = 2e-18
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 3486 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 3427
Query 60126 TACTACCGAGGATT 60139
||||||||||||||
Sbjct 3426 TACTACCGAGGATT 3413
>seq8129
Length=34426
Score = 105 bits (116), Expect = 8e-18
Identities = 69/76 (91%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
||||||| |||| | ||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 8947 TTTCTCCCCGGCGGTGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCA 8888
Query 60123 CTATACTACCGAGGAT 60138
||||||||||||||||
Sbjct 8887 CTATACTACCGAGGAT 8872
>seq256919
Length=264
Score = 96.9 bits (106), Expect = 4e-15
Identities = 61/66 (92%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 60074 CAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCG 60133
|||| |||||||||| |||||||||||||||||| || |||||||||||||||||||||
Sbjct 209 CAGGTAATCGAACCCAGGTCTCCCGCGTGACAGGTGGGGATACTCACCACTATACTACCG 150
Query 60134 AGGATT 60139
||||||
Sbjct 149 AGGATT 144
>seq100255
Length=840
Score = 96.9 bits (106), Expect = 4e-15
Identities = 64/71 (90%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 60067 TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTAT 60126
||| |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 840 TCCCCGGCGGGGAATCGAACCGCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTAT 781
Query 60127 ACTACCGAGGA 60137
||||| |||||
Sbjct 780 ACTACAGAGGA 770
>seq14773
Length=6164
Score = 86.0 bits (94), Expect = 7e-12
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 60060 AATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 60119
|| || |||| | | || |||| ||| | ||||||||||||||| ||||| |||||||
Sbjct 343 AACTTACTCCCCAACTGGAAATCAAACGCCGGTCTCCCGCGTGACGGGCGGGGATACTCA 284
Query 60120 CCACTATACTACCGAGGATT 60139
||||||||||||||||||||
Sbjct 283 CCACTATACTACCGAGGATT 264
>seq1267
Length=316221
Score = 86.0 bits (94), Expect = 7e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|||||||| | | || ||| || || | ||| ||| |||||||||||||||||||
Sbjct 205975 CCTCCTCTGAGCCTCAGCACTAAGTGAAGTGTTGACTCTTTTTGAATATTGTAATCAGAT 206034
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
| ||| | | || || | |||||| || || || || | | |||||||| | ||
Sbjct 206035 AAAGTTCTTCCATCTTCCAACTGCTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGAGGG 206094
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| | ||| || ||| |||||| || | | | | ||||| || | ||| ||
Sbjct 206095 ATCCCCTCTTTATCCTGGATTTTAGCCTTTACGTTTTCAATAGTGTCACTTGGTTCAACT 206154
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | ||||| ||||| || || || ||||| |||||||| |||||
Sbjct 206155 TCCAGGGTGATAGTTTTACCTGTCAGAGTCTTAACAAAGATCTGCAT 206201
>seq263599
Length=240
Score = 82.4 bits (90), Expect = 9e-11
Identities = 53/57 (93%), Gaps = 1/57 (2%)
Strand=Plus/Minus
Query 60083 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATT 60139
|||||| ||||||| |||||||||||||| |||||||||||||||||||||| ||||
Sbjct 214 GAACCCCGGTCTCC-GCGTGACAGGCGGAAATACTCACCACTATACTACCGACGATT 159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569767683938040
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