Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_002513.1 Length=33034 Score E Sequences producing significant alignments: (Bits) Value seq70663 87.8 4e-13 >seq70663 Length=227 Score = 87.8 bits (96), Expect = 4e-13 Identities = 128/176 (73%), Gaps = 5/176 (3%) Strand=Plus/Plus Query 5412 TGGTCTGAAAACACAAtttttttGTTGTCCAATTTAGTGGCAAAGCTGCCATATAAGGCG 5471 ||||| ||||| ||||| |||| |||| | || |||||||| | || || | |||| Sbjct 45 TGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAA-CGCCCGTAGAGGGCG 101 Query 5472 TTGGAAAGTAGCTTAGCTATGCTTCGCATGGTTTGGTTCTTTTCTTTGTCTGCTTTTTCT 5531 ||||| || | ||| || ||| |||| ||||||||| ||| | || || || Sbjct 102 TTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTT-TTTGCGCGATCGGCGCGCTCC 160 Query 5532 TTGGCTCCGATGTTTAGCTGCACGTATTCTTTGGCCACGCACTTCCACTCTGGGAA 5587 ||||| |||||||||||||||||||||| || |||||| ||| || ||||| Sbjct 161 TTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTC-GGGAA 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105227605170536