Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq629 95.1 8e-15
seq5467 91.5 9e-14
seq1267 87.8 1e-12
seq4435 84.2 1e-11
>seq629
Length=499154
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | ||||||| | ||||| |||| ||| |||||| || ||||||||||| ||
Sbjct 5964 CCTCCCCTCAGCCTCGGAACCAGATGTAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAA 5905
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || |||| || || || || || || || | ||| ||||| ||
Sbjct 5904 AGTGTTCGACCATCCTCCAGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGG 5845
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||||| |||||| |||| || |||| | || | | || ||
Sbjct 5844 ATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATTCTCTATTGTGTCACTTGGCTCCACT 5785
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||||||||| || ||||| || |||||||| || |||||
Sbjct 5784 TCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 5738
Score = 84.2 bits (92), Expect = 1e-11
Identities = 159/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 34161 ATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG 34220
|||| || ||||| || | || || || |||||| || || || |||||||| || |
Sbjct 6194 ATCCACCACGCAGTCTTAAGACAAGATGCAAAGTAGACTCCTTTTGAATGTTGTAATCTG 6135
Query 34221 ACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280
| || ||| | || || | || || || || || || || | ||| ||||| |
Sbjct 6134 AGAGTGTACGTCCATCCTCTAGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTG 6075
Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| | || |||||||| |||||| |||| || |||| | || | | || |
Sbjct 6074 GGATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATTCTCTATTGTGTCACTTGGCTCCA 6015
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTC 34394
| |||| ||||||||||| || ||||| || |||||||| || |||||| |||
Sbjct 6014 CTTCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATCCCTC 5961
>seq5467
Length=66102
Score = 91.5 bits (100), Expect = 9e-14
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| ||||| || | ||| ||| || || || |||||||| || || || | ||
Sbjct 29835 CAGAACCAGATGAAGAGTTGATTCCTTTTGGATATTGTAGTCAGAAAGGGTCCGTCCATC 29894
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| || || ||||| |||||||| | |||||||| || | | || |||||
Sbjct 29895 CTCCAGTTGTTTACCTGCAAAAATGAGTCTTTGCTGGTCTGGTGGAATACCTTCTTTGTC 29954
Query 34297 GGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355
|| ||||||||| | || | || | ||| | | ||| || |||| || ||||
Sbjct 29955 TTGAAT-TTTTGCTTTTACATTCTCAATAGTATCACTAGGTTCTACTTCCAGAGTAATGG 30013
Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||||| || || ||||||||||||||||||||
Sbjct 30014 TTTTGCCAGTTAGGGTTTTCACAAAGATCTGCAT 30047
>seq1267
Length=316221
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231
||||||||||| | ||| | || ||||| || || ||||| || || | |
Sbjct 206212 AGCCTCAGCACTAAGTGAAGTGTTGACTCTTTTTGAATATTGTAATCAGATAAAGTTCTT 206271
Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291
| || ||||||||||| ||||| ||||| | || ||||||||| || | | ||
Sbjct 206272 CCATCTTCCAACTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGAGGGATTCCTTCT 206331
Query 34292 TTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTG 34351
||||| ||||| ||| | || | || | || | | ||| || || | ||
Sbjct 206332 TTGTCTTGGATCTTAGCCTTCACATTTTCAATTGTGTCACTGGGTTCAACTTCTAGGGTA 206391
Query 34352 ATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||||||||| || ||||||||||||||||||||
Sbjct 206392 ATGGTTTTGCCGGTAAGGGTTTTCACAAAGATCTGCAT 206429
>seq4435
Length=89394
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| ||||| |||| ||| | || ||||||||| |||||||| || |||
Sbjct 36727 CCTCCACGCAGTCTCAGTACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCTGAC 36668
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| | | || ||||| ||||| || || ||||| | || || ||||| ||
Sbjct 36667 AGGGTTCTTCCATCTTCCAATTGCTTCCCAGCAAAAATTAACCTTTGTTGGTCTGGAGGG 36608
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | |||||| || ||||| ||||| | || | || | ||| | | ||| ||
Sbjct 36607 ATTCCCTCCTTATCTTGAATCTTA-GCTTTCACATTTTCGATTGTATCACTGGGTTCTAC 36549
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||||||||| || || ||||| || ||||| || |||||
Sbjct 36548 CTCAAGGGTGATGGTTTTTCCTGTCAGAGTCTTAACAAAAATTTGCAT 36501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 321942769770080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |