Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq1267 104 2e-17
seq629 86.0 5e-12
>seq1267
Length=316221
Score = 104 bits (114), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | |||||| ||||| ||||| || || ||||||||| ||||| || || |
Sbjct 205747 CCACCACGCAATCTCAATACTAAGTGGAGGGTCGACTCCTTCTGTATGTTATAATCTGAC 205806
Query 45170 A--GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
| ||| | | || |||||||| || || || || || |||| ||| ||||| ||||
Sbjct 205807 AAGGTT--CTTCCATCCTCCAGTTGCTTGCCAGCAAAAATTAACCTCTGCTGGTCTGGAG 205864
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||||| || ||| |||||| ||| || | | |||| | || |
Sbjct 205865 GGATCCCCTCTTTATCCTGAATTTTAGCCTTCACATTTTCAATAGTGTCACTTGGTTCAA 205924
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
| |||| ||| || || || || ||||||||||| |||||||||||||||
Sbjct 205925 CTTCCAGGGTGATGGTTTTACCTGTCAGAGTCTTAACAAAGATTTGCATG 205974
>seq629
Length=499154
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | || |||||| || | |||| || |||||| ||||||||||| ||
Sbjct 6192 CCACCACGCAGTCTTAAGACAAGATGCAAAGTAGACTCCTTTTGAATGTTGTAATCTGAG 6133
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
||| || | || || |||||||| || || || |||| | ||||||||| || ||
Sbjct 6132 AGTGTACGTCCATCCTCTAGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGG 6073
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || |||||||| || ||| || || | | | |||| | ||||||
Sbjct 6072 ATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATTCTCTATTGTGTCACTTGGCTCCACT 6013
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| || || || || || || || ||||||||||| ||||||||
Sbjct 6012 TCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 5966
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|| || || ||||||||||| ||| ||| | || ||||||||||| || || ||
Sbjct 5928 TCTTTTTGGATGTTGTAGTCAGAAAGTGTTCGACCATCCTCCAGTTGTTTACCAGCAAAG 5869
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|||| | ||||||||| || || | || |||||||| || ||| || || |
Sbjct 5868 ATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATTC 5809
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | |||| | |||||| |||| || || || || || || || |||||||||
Sbjct 5808 TCTATTGTGTCACTTGGCTCCACTTCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTCACA 5749
Query 45326 AAGATTTGCATGTTG 45340
|| ||||||||| ||
Sbjct 5748 AAAATTTGCATGGTG 5734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 393694297727653
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |