Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq1267 93.3 4e-14
seq5467 87.8 1e-12
>seq1267
Length=316221
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 24831 CATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAG 24890
||||||||| ||||| |||||| | ||||||||||| || ||| | || || ||| | ||
Sbjct 206430 CATGCAGATCTTTGTGAAAACCCTTACCGGCAAAACCATTACCCTAGAAGTTGAACCCAG 206371
Query 24891 CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCA 24950
|||| | |||| ||| |||| || || | |||||||| | || |||||
Sbjct 206370 TGACACAATTGAAAATGTGAAGGCTAAGATCCAAGACAAAGAAGGAATCCCTCCAGACCA 206311
Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010
||| | || || | ||| || || || |||||||| | ||| | |||||||
Sbjct 206310 GCAGAGGTTGATTTTTGCAGGAAAGCAGTTGGAAGATGGAAGAACTTTATCTGATTACAA 206251
Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTG 25041
|| || |||||| | || ||||| ||||||
Sbjct 206250 TATTCAAAAAGAGTCAACACTTCACTTAGTG 206220
>seq5467
Length=66102
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887
|| ||||||||| ||||| |||||| |||| |||||||| || || | || || ||| |
Sbjct 30051 CACCATGCAGATCTTTGTGAAAACCCTAACTGGCAAAACCATTACTCTGGAAGTAGAACC 29992
Query 24888 GAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGA 24947
|| || | | | || | ||| || | ||||||| | |||||||| | || ||
Sbjct 29991 TAGTGATACTATTGAGAATGTAAAAGCAAAAATTCAAGACAAAGAAGGTATTCCACCAGA 29932
Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTA 25007
||||||| | | || | ||| || ||||||||||| ||| ||| | || ||
Sbjct 29931 CCAGCAAAGACTCATTTTTGCAGGTAAACAACTGGAGGATGGACGGACCCTTTCTGACTA 29872
Query 25008 CAGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058
|| || || || || | || |||||| | || | |||||| | |||||
Sbjct 29871 CAATATCCAAAAGGAATCAACTCTTCATCTGGTTCTGCGATTGAGAGGAGG 29821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 416841906342560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |