Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_003266.2
Length=35994
Score E
Sequences producing significant alignments: (Bits) Value
seq70663 201 3e-47
seq73759 120 7e-23
>seq70663
Length=227
Score = 201 bits (222), Expect = 3e-47
Identities = 184/224 (82%), Gaps = 9/224 (4%)
Strand=Plus/Plus
Query 6011 GCCGGCGGAG-ATGCCTTTCAAGAGCCCCTCGTCCATC-TGGTCAGAAAAGACAATCTTT 6068
||| |||| | |||||||| | | | || | |||||| |||||||||||||||||||||
Sbjct 7 GCCCGCGGTGGATGCCTTTGAGG-GTGCCGCATCCATCGTGGTCAGAAAAGACAATCTTT 65
Query 6069 TTGTTGTCGAGTTTGGTGGCGAAGGAGCCGTAGAGGGCGTTGGAGAGGAGCTTGGCGATG 6128
| |||| || |||||||| || | ||||||||||||||||| || | ||||||||||
Sbjct 66 TG--TGTCAAGCTTGGTGGCAAACGC-CCGTAGAGGGCGTTGGACAGCAACTTGGCGATG 122
Query 6129 GAGCGCATGGTCTGGTTCTTTTCCTTGTCGGCGCGCTCCTTGGCGGCGATGTTGAGCTGC 6188
||||||| ||| ||||| ||| | ||||||||||||||||| |||||||| ||||||
Sbjct 123 GAGCGCAGGGTTTGGTT-TTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGC 181
Query 6189 ACGTACTCGCGCGCCACGCACTTCCATTCGGGGAAGACGGTGGT 6232
||||| |||||||| |||||| ||||||||| | ||||||||
Sbjct 182 ACGTATTCGCGCGCAACGCACCGCCATTCGGG--AAACGGTGGT 223
>seq73759
Length=212
Score = 120 bits (132), Expect = 7e-23
Identities = 95/113 (84%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 6480 TGCCATTCGCGCACGGCCAGCGCGCGCTCGTAGGGACTAAGGGGCGTGCCCCAGGGCATG 6539
|||||| |||| |||| |||||||||||||| || | || || | ||||| ||||||
Sbjct 61 TGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATG 120
Query 6540 GGGTGGGTGAGCGCGGAGGCGTACATGCCGCAGATGTCGTAGACGTAGAGGGG 6592
|||||||||||||||||||||||||||||||| ||||| | |||| ||||||
Sbjct 121 GGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGT-GAGGGG 172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114667346693896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |