Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3845 89.7 8e-13 >seq3845 Length=110360 Score = 89.7 bits (98), Expect = 8e-13 Identities = 137/192 (71%), Gaps = 5/192 (3%) Strand=Plus/Plus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 |||||||| || | ||||| ||| | ||||| || || || |||| || || ||| Sbjct 70850 TTTCCCATTGAATACCCAGACATCTGGCAGATGTATAAGAAAGCAGAGGCTTCATTCTGG 70909 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTG-TACGATTGGGAGACTCGTTTGACTGA 125116 || || ||||| || ||||||||||| |||||| ||| | ||||||| ||| | || Sbjct 70910 ACTGTAGAAGAAGTTGATCTGTCCAAAGACCTGATAC-AGTGGGAGA---ATTTAAAAGA 70965 Query 125117 AACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGT 125176 | ||| | | | ||||| || ||||| |||| |||||||| | ||||| || || Sbjct 70966 AGATGAACAACACTTTATTTCTCACATCCTGGCTTTCTTTGCTGCTAGTGATGGGATTGT 71025 Query 125177 CAACGACAATCT 125188 || || ||||| Sbjct 71026 TAATGAAAATCT 71037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738402567610680