Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1267 84.2 2e-11 >seq1267 Length=316221 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 || ||||||| |||||| || || ||||||||||| || || | |||| || | Sbjct 206443 CTCAACACTAGATGAAGAGTAGATTCTTTTTGAATGTTATAGTCTGACAATGTGCGACCA 206502 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 ||||||| ||| || || | ||||||| | ||| || || || | | ||| ||| Sbjct 206503 TCCTCCAACTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGAATTCCTTCTTTG 206562 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 || |||||| ||||| | | ||||| || ||| |||| || | || || Sbjct 206563 TCTTGAATTTTGGCCTTGACATTTTCAATGGTGTCACTAGGCTCCACTTCCAGAGTGATA 206622 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| || || || ||||| ||||| ||||||||| Sbjct 206623 GTTTTTCCTGTTAGCGTTTTTACAAAGATCTGCATC 206658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419778805024793