Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq2632 111 2e-19 >seq2632 Length=169618 Score = 111 bits (122), Expect = 2e-19 Identities = 139/188 (74%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 164520 AGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATTGC 164579 |||||||||| || ||| || |||||| ||||| ||| |||||||||| |||| Sbjct 136138 AGGAATTTTACTATTTGGGCCACCTGGTACGGGTAAGACACTAATGGCTCGGCAAATTGG 136197 Query 164580 TCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAACAA 164636 |||| | |||||| || || ||| || || || |||||||| | | ||| |||| Sbjct 136198 TCAAA-TGTTAAATGCTCGAGAGCCG--AAGATAGTGAATGGTCCCCAGATCTTGGACAA 136254 Query 164637 ATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGAACA 164696 |||||| || || |||||||| || | |||| | | ||| || |||||||||||| | Sbjct 136255 ATATGTTGGAGAATCAGAAGCAAACATCAGAAGGCTTTTTGCAGAAGCTGAAGAAGAAGA 136314 Query 164697 AAAGAAAG 164704 |||||||| Sbjct 136315 AAAGAAAG 136322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593735851018800