Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq2412 91.5 8e-14 seq8895 87.8 9e-13 seq4127 87.8 9e-13 seq12 87.8 9e-13 >seq2412 Length=182757 Score = 91.5 bits (100), Expect = 8e-14 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| ||| Sbjct 143160 GGATCGAACCCACGACTTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACGGG 143219 Query 11528 CC 11529 || Sbjct 143220 CC 143221 >seq8895 Length=27773 Score = 87.8 bits (96), Expect = 9e-13 Identities = 75/90 (83%), Gaps = 5/90 (6%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCC--ATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 || |||||| | ||||||| ||| || ||||||| ||||||||||||||| |||| Sbjct 5650 ATTAAAAAT-ATTTTGGCCCGCATGG--GGGTCGAACCCACGACCTTCGCGTTATCAGCA 5706 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||| ||||| Sbjct 5707 CGACGCTCTAACCAACTGAGCTAACGGGCC 5736 >seq4127 Length=104586 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct 7659 GGGTCGAACCCACGACCTTCGCGTTATCAGCACGACGCTCTAACCAACTGAGCTAACGGG 7600 Query 11528 CC 11529 || Sbjct 7599 CC 7598 >seq12 Length=2013550 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 1892705 GGATCGAACCCACGACTTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACAGG 1892764 Query 11528 CC 11529 || Sbjct 1892765 CC 1892766 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260577212505268