Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq964 185 1e-42 >seq964 Length=371534 Score = 185 bits (204), Expect = 1e-42 Identities = 201/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || ||||| || | | ||||| ||||| |||||||| || ||||| ||||| ||| Sbjct 305525 GCCAAACGTCACCGAAAAGTGCTTCGTGATAATATCCAAGGTATTACCAAACCAGCAATC 305584 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || ||||| |||||||||||||| |||||| |||| || | |||| || || | | Sbjct 305585 CGACGACTGGCACGTCGTGGTGGAGTGAAGCGTATCTCCGGTCTTATCTACGAGGAAACT 305644 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||||||||| | || | ||| |||||||| || ||| | |||||| ||| Sbjct 305645 CGTGGTGTTTTGAAGGTGTTTTTGGAGAACGTTATCCGGGACGCTGTAACCTATACAGAG 305704 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || ||||| |||||||| ||| ||||||| | || ||||| | || | ||||| Sbjct 305705 CATGCCAAACGGAAGACTGTAACCGCCATGGACGTAGTATATGCCCTAAAGAGACAAGGT 305764 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| |||| ||||| ||| ||||| Sbjct 305765 CGTACCCTTTACGGTTTCGGAGGTTAA 305791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78812983152549