Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_006879.1 Length=34450 Score E Sequences producing significant alignments: (Bits) Value seq70663 215 1e-51 seq73759 86.0 1e-12 >seq70663 Length=227 Score = 215 bits (238), Expect = 1e-51 Identities = 192/232 (83%), Gaps = 9/232 (4%) Strand=Plus/Plus Query 5670 CGTGCCCCGCGGCG-ATGCTTTTGATGGTGGAGGGGTCCATC-TGATCAGAAAACACGAT 5727 |||| ||||||| | |||| ||||| |||| | |||||| || |||||||| || || Sbjct 3 CGTGGCCCGCGGTGGATGCCTTTGAGGGTGCCGCA-TCCATCGTGGTCAGAAAAGACAAT 61 Query 5728 CTTTTTATTGTCAAGTTTGGTGGCGAAAGACCCGTAGAGGGCGTTGGAAAGCAACTTGGC 5787 ||||| ||||||| |||||||| || | |||||||||||||||||| ||||||||||| Sbjct 62 CTTTTG--TGTCAAGCTTGGTGGCAAACG-CCCGTAGAGGGCGTTGGACAGCAACTTGGC 118 Query 5788 GATGGAGCGCAGGGTCTGATTTTTCTCCCGATCGGCCCTCTCCTTGGCGGCGATGTTGAG 5847 ||||||||||||||| || ||||| | |||||||| | ||||||||| |||||||| || Sbjct 119 GATGGAGCGCAGGGTTTGGTTTTTG-CGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAG 177 Query 5848 TTGCACGTACTCGCGGGCCACGCACCGCCACTCGGGGAACACGGCGGTGCGC 5899 |||||||| ||||| || ||||||||||| ||||| | |||| ||||||| Sbjct 178 CTGCACGTATTCGCGCGCAACGCACCGCCATTCGGG--AAACGGTGGTGCGC 227 >seq73759 Length=212 Score = 86.0 bits (94), Expect = 1e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 6170 TCGTAGGGATTCAGGGGCGGTCCCCAGGGCATGGGGTGGGTCAGGGCCGAGGCGTACATG 6229 ||||| || || || || || ||||| |||||||||||||| || || |||||||||||| Sbjct 88 TCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGTGGGTGAGCGCGGAGGCGTACATG 147 Query 6230 CCGCAGATGTCGTACACGTACAGGGGCTCCCT 6261 ||||| ||||| | |||| ||||||| || Sbjct 148 CCGCAAATGTCCGAAACGTGAGGGGGCTCTCT 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109743373412792