Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq4041 86.0 1e-11 >seq4041 Length=106889 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 193683 GTTTCCTTTGAGATGCCAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATA 193742 ||||||||||| | |||||||| | |||||||||||| | || ||||| |||| Sbjct 89276 GTTTCCTTTGATTTAAGTGAGTATACAGCCAATGTTGATGCTCTTGGTACTCTCCGAATT 89217 Query 193743 CTTGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACC 193802 ||||| || | |||| || ||| ||||| | | || | ||||||||||| || Sbjct 89216 CTTGATGCCATACGTACGTGTGGATTGGAGGGAATTACACGGTTTTATCAGGCATCCACT 89157 Query 193803 AGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCA 193862 || ||||| ||||| || | || ||||| |||||| || || || |||| Sbjct 89156 AGTGAACTTTATGGAAAGGTACAAGAAGTTCCACAGAGAGAAACTACTCCTTTCTATCCT 89097 Query 193863 CGCTCTCCTTATGGT 193877 || || ||||||||| Sbjct 89096 CGTTCCCCTTATGGT 89082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 804660185269080