Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq4435 120 3e-22
seq1267 114 1e-20
seq5467 109 5e-19
seq629 91.5 1e-13
>seq4435
Length=89394
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
|||||||| ||||| ||||| | || || ||||| ||||| ||||| ||||||||
Sbjct 36045 ATGCAAATCTTTGTTAAAACACTTACTGGAAAAACAATTACTCTGGAAGTTGAACCCAGT 36104
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
||| || ||| | |||||| |||||| || |||||||| |||| ||||||
Sbjct 36105 GATACTATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGAATTCCACCAGATCAA 36164
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||||| | |||| ||| || ||||| ||||||||| | || | | |||||||||
Sbjct 36165 CAAAGATTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGCACCTTATCAGATTATAAT 36224
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415
|| || || || || ||||| || || || | | |||| |||||||
Sbjct 36225 ATTCAGAAGGAGTCCACACTTCACTTGGTACTTAGGTTGCGTGGTGGCA 36273
Score = 100 bits (110), Expect = 2e-16
Identities = 164/235 (70%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245
||||||||||||||| || || |||| || |||||||| ||| | || ||||||||
Sbjct 36500 AATGCAAATTTTTGTTAAGACTCTGACAGGAAAAACCATCACCCTTGAGGTAGAACCCAG 36559
Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305
||| | | | | || ||| || ||| || || || || | || || ||
Sbjct 36560 TGATACAATCGAAAATGTGAAAGCTAAGATTCAAGATAAGGAGGGAATCCCTCCAGACCA 36619
Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365
||||||| | |||| ||| || || |||||||||||| | ||| || | ||||| ||
Sbjct 36620 ACAAAGGTTAATTTTTGCTGGGAAGCAATTGGAAGATGGAAGAACCCTGTCAGATTACAA 36679
Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG-CAATAA 111419
|| || |||||||| || || || || || || | ||||| || || ||||||
Sbjct 36680 CATTCAGAAAGAATCAACCCTTCACTTGGTACTGAGACTGCGTGGAGGCCAATAA 36734
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| || || |||||||| | || ||||| || || ||| | ||| ||||||||
Sbjct 32655 ATGCAGATCTTCGTCAAAACTCTTACAGGCAAGACTATAACCCTCGAAGTTGAACCCAGT 32714
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
||| || ||| | || ||| |||||| || |||||||| |||| ||||||
Sbjct 32715 GATACTATTGAAAACGTGAAAGCAAAAATCCAGGATAAAGAAGGAATTCCACCAGATCAA 32774
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT 111342
||||| | |||| ||| || |||||||| ||||||
Sbjct 32775 CAAAGATTGATTTTTGCAGGGAAACAATTAGAAGAT 32810
>seq1267
Length=316221
Score = 114 bits (126), Expect = 1e-20
Identities = 168/238 (71%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 111178 AGTTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACG 111237
|| |||| ||||| || ||||| |||||| | || || ||||| || || ||||| |
Sbjct 206666 AGATTAAGGATGCAGATCTTTGTAAAAACGCTAACAGGAAAAACTATCACTCTGGAAGTG 206607
Query 111238 GAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCC 111297
|| || || || | ||| | || || |||||| ||||||||||| |||||
Sbjct 206606 GAGCCTAGTGACACCATTGAAAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATTCCC 206547
Query 111298 GTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCC 111357
|| ||||| || | |||| ||| || ||||| ||||| ||| | || || |
Sbjct 206546 CCAGACCAACAGAGATTAATTTTTGCTGGAAAACAGTTGGAGGATGGTCGCACATTGTCA 206487
Query 111358 GATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415
|| ||||| || |||||||||||||| || ||| |||||||| | || || || ||||
Sbjct 206486 GACTATAACATTCAAAAAGAATCTACTCTTCATCTAGTGTTGAGACTCCGTGGGGGCA 206429
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| || ||||| ||||| | |||||||||||||||||| | ||| ||||||||
Sbjct 206429 ATGCAGATCTTTGTGAAAACCCTTACCGGCAAAACCATTACCCTAGAAGTTGAACCCAGT 206370
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| | ||| | || || || || ||||||||||| | || || ||
Sbjct 206369 GACACAATTGAAAATGTGAAGGCTAAGATCCAAGACAAAGAAGGAATCCCTCCAGACCAG 206310
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
|| ||| | |||| ||| || || || ||||||||| | |||| | | ||||| |||
Sbjct 206309 CAGAGGTTGATTTTTGCAGGAAAGCAGTTGGAAGATGGAAGAACTTTATCTGATTACAAT 206250
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415
|| |||||||| || ||||| || |||||| || | || | || ||||
Sbjct 206249 ATTCAAAAAGAGTCAACACTTCACTTAGTGCTGAGGCTCAGAGGAGGCA 206201
>seq5467
Length=66102
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| || ||||| ||||| | || |||||||||||||| ||||| ||||| ||
Sbjct 30047 ATGCAGATCTTTGTGAAAACCCTAACTGGCAAAACCATTACTCTGGAAGTAGAACCTAGT 29988
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
||| || ||| | |||||| ||||||| ||||||||||| |||| || ||
Sbjct 29987 GATACTATTGAGAATGTAAAAGCAAAAATTCAAGACAAAGAAGGTATTCCACCAGACCAG 29928
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||||| || |||| ||| || |||||| |||| ||| || | | || || |||
Sbjct 29927 CAAAGACTCATTTTTGCAGGTAAACAACTGGAGGATGGACGGACCCTTTCTGACTACAAT 29868
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCG 111401
|| ||||| ||||| || || ||| | || ||||
Sbjct 29867 ATCCAAAAGGAATCAACTCTTCATCTGGTTCTGCG 29833
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| ||||||||||| || | || || ||||| || || |||| |||||| ||
Sbjct 29819 ATGCAGATTTTTGTCAAGACCCTCACTGGAAAAACTATCACTTTGGAGGTGGAACCAAGT 29760
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| | ||| | |||||| ||| || |||||||||||| |||| || |||
Sbjct 29759 GACACAATTGAGAATGTAAAAGCAAAGATCCAAGACAAAGAAGGCATTCCACCTGACCAA 29700
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
|| || || |||| ||| || ||||| |||| ||| || | | |||||||||
Sbjct 29699 CAGAGACTGATTTTTGCAGGTAAACAGCTGGAGGATGGACGGACCCTTTCTGATTATAAT 29640
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAATAAAT 111421
|| || ||||||||||| | ||| | || | | ||||| ||||| | ||||
Sbjct 29639 ATTCAGAAAGAATCTACTTTGCATCTTGTCCTAAGACTGCGTGGTGGAACAAAAT 29585
>seq629
Length=499154
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
|||||||||||||| || || | || || |||||||| || ||||| ||| || ||
Sbjct 5738 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAAACCATCACTTTGGAAGTGGAGCCAAGT 5797
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| | | | | |||||| ||| || ||||| |||||| | || || |||
Sbjct 5798 GACACAATAGAGAATGTAAAAGCAAAGATCCAAGACAAGGAAGGCATCCCACCTGACCAA 5857
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111364
|| || || || | ||| || |||||| |||| ||| || || ||| | | || || |
Sbjct 5858 CAGAGACTGATCTTTGCTGGTAAACAACTGGAGGATGGTCGAACACTTT--CTGACTACA 5915
Query 111365 ATATACAAAAAGAATCTACACTACAT 111390
| || |||||||||||||| ||||||
Sbjct 5916 ACATCCAAAAAGAATCTACCCTACAT 5941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421561352650600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |