Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq201610 96.9 7e-15 seq3461 96.9 7e-15 seq207 95.1 2e-14 seq105208 93.3 9e-14 seq94776 93.3 9e-14 seq85882 93.3 9e-14 seq78828 93.3 9e-14 seq78603 93.3 9e-14 seq9986 93.3 9e-14 seq8781 93.3 9e-14 seq6766 93.3 9e-14 seq6134 93.3 9e-14 seq5675 93.3 9e-14 seq2842 91.5 3e-13 seq336 91.5 3e-13 seq69 91.5 3e-13 seq169746 89.7 1e-12 seq4296 89.7 1e-12 seq227751 87.8 4e-12 seq91227 87.8 4e-12 seq83000 87.8 4e-12 seq218070 84.2 4e-11 seq19480 84.2 4e-11 >seq201610 Length=587 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 206 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGACC 265 Query 142113 CCCGCCAGAGACG 142125 |||| ||| |||| Sbjct 266 CCCGACAGGGACG 278 >seq3461 Length=125705 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142051 ATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGA 142110 ||||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||| Sbjct 62893 ATGTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGA 62834 Query 142111 CCCCCGCCAGAGA 142123 |||||| ||| || Sbjct 62833 CCCCCGGCAGGGA 62821 >seq207 Length=854559 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 493536 ATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 493477 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 493476 AGCCCCACGTTGGGC 493462 >seq105208 Length=2526 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109 || ||| |||| ||||| |||| ||||||||||||||||||||||||||| |||||||| Sbjct 1727 CAAGTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCTCGGGTTCG 1668 Query 142110 ACCCCCGCCAGAGA 142123 ||||||| ||| || Sbjct 1667 ACCCCCGGCAGGGA 1654 >seq94776 Length=926 Score = 93.3 bits (102), Expect = 9e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 192 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGACC 133 Query 142113 CCCGCCAGAGA 142123 |||| ||| || Sbjct 132 CCCGGCAGGGA 122 >seq85882 Length=1513 Score = 93.3 bits (102), Expect = 9e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 649 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGACC 590 Query 142113 CCCGCCAGAGA 142123 |||| ||| || Sbjct 589 CCCGGCAGGGA 579 >seq78828 Length=2101 Score = 93.3 bits (102), Expect = 9e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 676 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGACC 735 Query 142113 CCCGCCAGAGA 142123 |||| ||| || Sbjct 736 CCCGGCAGGGA 746 >seq78603 Length=1116 Score = 93.3 bits (102), Expect = 9e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 837 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGACC 896 Query 142113 CCCGCCAGAGA 142123 |||| ||| || Sbjct 897 CCCGGCAGGGA 907 >seq9986 Length=20591 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109 || ||| |||| ||||| |||| ||||||||||||||||||||||||||| |||||||| Sbjct 8677 CACGTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCG 8736 Query 142110 ACCCCCGCCAGAGA 142123 ||||||| ||| || Sbjct 8737 ACCCCCGGCAGGGA 8750 >seq8781 Length=26719 Score = 93.3 bits (102), Expect = 9e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 294 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGACC 235 Query 142113 CCCGCCAGAGA 142123 |||| ||| || Sbjct 234 CCCGGCAGGGA 224 Score = 93.3 bits (102), Expect = 9e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 17232 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGACC 17291 Query 142113 CCCGCCAGAGA 142123 |||| ||| || Sbjct 17292 CCCGGCAGGGA 17302 >seq6766 Length=47278 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109 || ||| |||| ||||| |||| ||||||||||||||||||||||||||| |||||||| Sbjct 13391 CAAGTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCG 13450 Query 142110 ACCCCCGCCAGAGA 142123 ||||||| ||| || Sbjct 13451 ACCCCCGGCAGGGA 13464 >seq6134 Length=57321 Score = 93.3 bits (102), Expect = 9e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 16657 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGACC 16716 Query 142113 CCCGCCAGAGA 142123 |||| ||| || Sbjct 16717 CCCGGCAGGGA 16727 >seq5675 Length=67592 Score = 93.3 bits (102), Expect = 9e-14 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 27652 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 27711 Query 142563 CCCCACATCGGGCAGAAG 142580 |||||| | |||| |||| Sbjct 27712 CCCCACGTTGGGC-GAAG 27728 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 28842 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 28901 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 28902 CCCCACGTTGGGC 28914 >seq2842 Length=157763 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 128367 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 128308 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 128307 CCCCACGTTGGGC 128295 >seq336 Length=687207 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 261696 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 261637 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 261636 CCCCACGTTGGGC 261624 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 269496 AGCCCGACTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 269555 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 269556 CCCCACGTTGGGC 269568 >seq69 Length=1359349 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1355846 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1355787 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 1355786 CCCCACGTTGGGC 1355774 >seq169746 Length=728 Score = 89.7 bits (98), Expect = 1e-12 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 634 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGACC 575 Query 142113 CCCG 142116 |||| Sbjct 574 CCCG 571 >seq4296 Length=97416 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 3070 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3011 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 3010 CCCACGTTGGGC 2999 >seq227751 Length=684 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 560 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTGCCGGGTTCGACC 501 Query 142113 CCCGCCAGAGA 142123 || | ||| || Sbjct 500 CCTGGCAGGGA 490 >seq91227 Length=1005 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||| ||||||| Sbjct 191 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGTTTCGACC 132 Query 142113 CCCGCCAGAGA 142123 |||| ||| || Sbjct 131 CCCGGCAGGGA 121 >seq83000 Length=4046 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 1516 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTCGACC 1575 Query 142113 CCCGCCAGAGA 142123 ||| ||| || Sbjct 1576 TCCGGCAGGGA 1586 >seq218070 Length=286 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| |||||| |||| Sbjct 98 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCCCGGGTTTGACC 39 Query 142113 CCCGCCAGAGA 142123 ||| ||| || Sbjct 38 CCCAGCAGGGA 28 >seq19480 Length=1544 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||| ||||||||||||||| ||| ||||||| Sbjct 89 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGATTTCTAATCCAAAGGTCACGGATTCGACC 148 Query 142113 CCCGCCAGAGA 142123 |||| ||| || Sbjct 149 CCCGGCAGGGA 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1024059977382913