Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq3845 111 3e-19
seq6658 105 1e-17
seq1632 84.2 4e-11
>seq3845
Length=110360
Score = 111 bits (122), Expect = 3e-19
Identities = 164/227 (72%), Gaps = 8/227 (4%)
Strand=Plus/Plus
Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668
|| ||||| || || || || |||| || | |||||||| || || ||||| ||||||
Sbjct 72763 CTTTTCAATGCAATTGAAACCTTGCCTTGTGTGAAGAAGAAAGCAGATTGGGCTCTCAAC 72822
Query 42669 TGGATCGAGAGTC--CCGAC-GCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTC 42725
||||| | ||| || || || || || || ||| | | ||||||||| | || ||
Sbjct 72823 TGGATAG---GTCATCCTACAGCTACTTTTGGTGAGCGAGTTGTAGCCTTTGCTGCTGTG 72879
Query 42726 GAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTC 42784
|||||||| ||||| || || | || || || || |||||||| ||| ||| |||| |
Sbjct 72880 GAGGGCATATTCTTTTCTGGGTCATTTGCATCAATATTCTGGCTTAAGAAGAGAGGTCT- 72938
Query 42785 GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
|||||| || | || ||| || ||||| ||||| || || ||||
Sbjct 72939 GATGCCTGGTTTGACATTCAGTAATGAACTTATCAGTAGAGATGAGG 72985
>seq6658
Length=47451
Score = 105 bits (116), Expect = 1e-17
Identities = 157/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668
|| ||||| || || || || | ||||| | ||||||||||| || ||||| || |||
Sbjct 25056 CTCTTCAATGCTATTGAAACCTTACCCTGTGTTAAGAAGAAGGCTGATTGGGCCCTGAAC 24997
Query 42669 TGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728
||||| || | | || | || ||| | || |||||||| | || || ||
Sbjct 24996 TGGATTGATAACAATGCTGCCCCATTTCCTGAGCGACTTGTAGCCTTCGCTGCTGTAGAA 24937
Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATG 42788
|| |||||||| ||||| |||| ||||| ||||||||| | ||| ||| || ||||
Sbjct 24936 GGGATCTTCTTTTCGGGTTCCTTTGCCTCTATCTTCTGGTTAAAGAAGAGGGGAATGATG 24877
Query 42789 CCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
|| || | || ||| |||||||| || ||||| || ||||
Sbjct 24876 CCTGGCTTGACTTTCAGTAACGAACTGATAAGCAGAGATGAGG 24834
>seq1632
Length=265768
Score = 84.2 bits (92), Expect = 4e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 244722 TGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGAT 244781
|||||| |||||||| || || | |||||| || |||||||| || |||| ||| || |
Sbjct 23374 TGTACTCTACAATCTCTGTACATAAGTTACTACATTTGATGGTTCCAAGGTTCTGCTGGT 23433
Query 244782 TGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGG 244841
| ||||| ||| ||||| || |||||||||||| | || ||| || || | ||| |
Sbjct 23434 TTGACTTTCTGTTACAGGCATCTTTGTAGAGCATGTATGGTGTCCCAGTTTCAACCTGAG 23493
Query 244842 C 244842
|
Sbjct 23494 C 23494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 940953826597680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |