Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_010956.1
Length=35083
Score E
Sequences producing significant alignments: (Bits) Value
seq70663 201 3e-47
seq73759 125 2e-24
>seq70663
Length=227
Score = 201 bits (222), Expect = 3e-47
Identities = 167/198 (84%), Gaps = 7/198 (4%)
Strand=Plus/Plus
Query 6009 CATCCATC-TGGTCAGAAAAGACTAtttttttATTGTCAAGCTTGGTGGCGAAGGAGCCA 6067
|||||||| |||||||||||||| || |||| |||||||||||||||| || | ||
Sbjct 36 CATCCATCGTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGC-CCG 92
Query 6068 TAGAGGGCGTTGGATAGAAGCTTGGCGATGGATCTCATGGTCTGATTTTTGTCACGGTCG 6127
|||||||||||||| || | |||||||||||| | || ||| || |||||| | || |||
Sbjct 93 TAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTTG-CGCGATCG 151
Query 6128 GCGCGCTCCTTGGCCGCGATGTTTAGCTGGACATACTCGCGCGCGACGCACTTCCATTCG 6187
||||||||||||||||||||||||||||| || || |||||||| |||||| |||||||
Sbjct 152 GCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCG 211
Query 6188 GGGAAGACGGTGGTGCGC 6205
|| | ||||||||||||
Sbjct 212 GG--AAACGGTGGTGCGC 227
>seq73759
Length=212
Score = 125 bits (138), Expect = 2e-24
Identities = 87/99 (88%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 6448 CTGCCACTCGCGGGCGGCCAGCGCTCGCTCGTAGGGGTTGAGGGGCGGACCCCAGGGCAT 6507
|||||| |||||||||| ||||| |||||||| |||||||| || |||||||| |||||
Sbjct 60 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 119
Query 6508 GGGATGAGTGAGGGCGGAGGCGTACATGCCGCAGATGTC 6546
||| || ||||| |||||||||||||||||||| |||||
Sbjct 120 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTC 158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 111762074893970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |