Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_010956.1 Length=35083 Score E Sequences producing significant alignments: (Bits) Value seq70663 201 3e-47 seq73759 125 2e-24 >seq70663 Length=227 Score = 201 bits (222), Expect = 3e-47 Identities = 167/198 (84%), Gaps = 7/198 (4%) Strand=Plus/Plus Query 6009 CATCCATC-TGGTCAGAAAAGACTAtttttttATTGTCAAGCTTGGTGGCGAAGGAGCCA 6067 |||||||| |||||||||||||| || |||| |||||||||||||||| || | || Sbjct 36 CATCCATCGTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGC-CCG 92 Query 6068 TAGAGGGCGTTGGATAGAAGCTTGGCGATGGATCTCATGGTCTGATTTTTGTCACGGTCG 6127 |||||||||||||| || | |||||||||||| | || ||| || |||||| | || ||| Sbjct 93 TAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTTG-CGCGATCG 151 Query 6128 GCGCGCTCCTTGGCCGCGATGTTTAGCTGGACATACTCGCGCGCGACGCACTTCCATTCG 6187 ||||||||||||||||||||||||||||| || || |||||||| |||||| ||||||| Sbjct 152 GCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCG 211 Query 6188 GGGAAGACGGTGGTGCGC 6205 || | |||||||||||| Sbjct 212 GG--AAACGGTGGTGCGC 227 >seq73759 Length=212 Score = 125 bits (138), Expect = 2e-24 Identities = 87/99 (88%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 6448 CTGCCACTCGCGGGCGGCCAGCGCTCGCTCGTAGGGGTTGAGGGGCGGACCCCAGGGCAT 6507 |||||| |||||||||| ||||| |||||||| |||||||| || |||||||| ||||| Sbjct 60 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 119 Query 6508 GGGATGAGTGAGGGCGGAGGCGTACATGCCGCAGATGTC 6546 ||| || ||||| |||||||||||||||||||| ||||| Sbjct 120 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTC 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111762074893970