Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_011202.1 Length=34794 Score E Sequences producing significant alignments: (Bits) Value seq70663 134 3e-27 seq73759 93.3 9e-15 >seq70663 Length=227 Score = 134 bits (148), Expect = 3e-27 Identities = 158/207 (76%), Gaps = 10/207 (5%) Strand=Plus/Plus Query 6054 GATGCCTTTCATGAGGTTTTCG--TCCATT-TGGTCAGAAAACACAAtttttttATTGTC 6110 ||||||||| |||| | || ||||| ||||||||||| ||||| |||| |||| Sbjct 17 GATGCCTTT---GAGGGTGCCGCATCCATCGTGGTCAGAAAAGACAATCTTTTG--TGTC 71 Query 6111 AAGTTTGGTGGCAAATGATCCATACAGGGCGTTGGATAAAAGTTTGGCAATGGATCGCAT 6170 ||| ||||||||||| | || || ||||||||||| | | ||||| ||||| |||| Sbjct 72 AAGCTTGGTGGCAAACGC-CCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAG 130 Query 6171 GGTTTGGTTCTTTTCCTTGTCCGCGCGCTCTTTGGCGGCGATGTTGAGTTGGACATACTC 6230 ||||||||| ||| | || |||||||| ||||| |||||||| || || || || || Sbjct 131 GGTTTGGTT-TTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTC 189 Query 6231 GCGTGCCAGGCACTTCCATTCGGGGAA 6257 ||| || | |||| ||||||||| || Sbjct 190 GCGCGCAACGCACCGCCATTCGGGAAA 216 >seq73759 Length=212 Score = 93.3 bits (102), Expect = 9e-15 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 6511 TGCCATTCTCGAGCTGCCAGTGCGCGCTCATATGGGTTAAGGGGACTGCCCCATGGCATG 6570 |||||| | || || || || |||||||| |||||||| || || |||||||||||| Sbjct 61 TGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATG 120 Query 6571 GGATGGGTGAGTGCAGAGGCATACATGCCACAGATGTCATAGACGT 6616 || |||||||| || ||||| |||||||| || ||||| | |||| Sbjct 121 GGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGT 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110840424454696