Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_011203.1 Length=35343 Score E Sequences producing significant alignments: (Bits) Value seq70663 168 2e-37 seq73759 105 2e-18 >seq70663 Length=227 Score = 168 bits (186), Expect = 2e-37 Identities = 151/183 (83%), Gaps = 5/183 (3%) Strand=Plus/Plus Query 6060 TCCATC-TGGTCAGAAAACACAATCTTCTTGTTGTCCAGCTTGGTGGCAAATGATCCATA 6118 |||||| ||||||||||| |||||||| |||| ||| |||||||||||||| | || || Sbjct 38 TCCATCGTGGTCAGAAAAGACAATCTT-TTGT-GTCAAGCTTGGTGGCAAACGC-CCGTA 94 Query 6119 GAGGGCATTGGATAGAAGCTTGGCGATGGAGCGCATGGTTTGGTTCTTTTCCTTGTCCGC 6178 |||||| ||||| || | ||||||||||||||||| ||||||||| ||| | || || Sbjct 95 GAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTT-TTTGCGCGATCGGC 153 Query 6179 GCGCTCCTTGGCGGTGATGTTAAGCTGGACGTACTCGCGCGCCACACATTTCCATTCAGG 6238 |||||||||||| | |||||| ||||| ||||| |||||||| || || |||||| || Sbjct 154 GCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGG 213 Query 6239 AAA 6241 ||| Sbjct 214 AAA 216 >seq73759 Length=212 Score = 105 bits (116), Expect = 2e-18 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 6494 CTGCCATTCTCGAACTGCCAGCGCGCGCTCATAGGGGTTAAGAGGGGTGCCCCAGGGCAT 6553 ||||||| | || | || ||||||||||| || ||||| || |||| ||||| ||||| Sbjct 60 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 119 Query 6554 GGGGTGGGTGAGCGCGGAGGCATACATGCCACAGATATCGTAGACATAGAGGGGCTCT 6611 ||||||||||||||||||||| |||||||| || || || | || | |||||||| Sbjct 120 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGTGAGGGGGCTCT 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112591241379130