Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq629 111 2e-19 seq5467 105 7e-18 seq1267 95.1 1e-14 >seq629 Length=499154 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||||||||||||||| || | ||||| ||||| ||||||||||| | | Sbjct 6159 GACTCCTTTTGAATGTTGTAATCTGAGAGTGTACGTCCATCCTCTAGTTGTTTACCAGCA 6100 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||||||||| || || || ||||| ||||| ||| ||| ||||| Sbjct 6099 AAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTTGCTTTTACA 6040 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | | |||||| || | || | ||||| ||||| || || || Sbjct 6039 TTCTCTATTGTGTCACTTGGCTCCACTTCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTC 5980 Query 138601 ACAAAAATCTGCAT 138614 |||||||| ||||| Sbjct 5979 ACAAAAATTTGCAT 5966 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||||| | | || || ||||| ||||||||||| | || || ||||| Sbjct 5947 AACCAGATGTAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTTCGACCATCCTC 5888 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 ||||||||||| | | |||| || | ||||||||| || || || ||||| ||||| Sbjct 5887 CAGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTG 5828 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 ||| ||| ||||| | || | ||||| | | |||||| || | || | ||||| Sbjct 5827 GATCTTTGCTTTTACATTCTCTATTGTGTCACTTGGCTCCACTTCCAAAGTGATGGTTTT 5768 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 ||||| || || || |||||||| ||||||| Sbjct 5767 TCCAGTGAGGGTCTTCACAAAAATTTGCATGG 5736 >seq5467 Length=66102 Score = 105 bits (116), Expect = 7e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| |||| ||| | ||| | |||| |||||||| || |||||||| Sbjct 29821 CCTCCTCTCAATCGCAGAACCAGATGAAGAGTTGATTCCTTTTGGATATTGTAGTCAGAA 29880 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| ||||||||||| | | | || || | || ||||| || || Sbjct 29881 AGGGTCCGTCCATCCTCCAGTTGTTTACCTGCAAAAATGAGTCTTTGCTGGTCTGGTGGA 29940 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| |||||| ||||| | || | || || | | || || Sbjct 29941 ATACCTTCTTTGTC-TTGAATTTTTGCTTTTACATTCTCAATAGTATCACTAGGTTCTAC 29999 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 || | || | ||||| ||||| || ||||| ||||| |||||||||| Sbjct 30000 TTCCAGAGTAATGGTTTTGCCAGTTAGGGTTTTCACAAAGATCTGCATGG 30049 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| || |||||||| | | | || || | ||||||||| || || || ||||||||| Sbjct 29665 TCCTCCAGCTGTTTACCTGCAAAAATCAGTCTCTGTTGGTCAGGTGGAATGCCTTCTTTG 29724 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| ||| ||||| | || | ||||| | | |||||||| | || | Sbjct 29725 TCTTGGATCTTTGCTTTTACATTCTCAATTGTGTCACTTGGTTCCACCTCCAAAGTGATA 29784 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| ||||| || || || |||||||||||||| Sbjct 29785 GTTTTTCCAGTGAGGGTCTTGACAAAAATCTGCAT 29819 >seq1267 Length=316221 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| |||| ||| | | || || ||||||||||| ||||| || || || || Sbjct 206445 CAACACTAGATGAAGAGTAGATTCTTTTTGAATGTTATAGTCTGACAATGTGCGACCATC 206504 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 ||| | ||||| || | | | |||| | ||||||||| || || || ||||||||||| Sbjct 206505 CTCCAACTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGAATTCCTTCTTTGTC 206564 Query 138522 GGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| |||| | || | | ||| | |||||| | | |||||| || | || | | Sbjct 206565 -TTGAATTTTGGCCTTGACATTTTCAATGGTGTCACTAGGCTCCACTTCCAGAGTGATAG 206623 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || || || ||||||||||| |||||||| Sbjct 206624 TTTTTCCTGTTAGCGTTTTTACAAAGATCTGCAT 206657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494483342718960