Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq629 111 2e-19
seq5467 105 7e-18
seq1267 95.1 1e-14
>seq629
Length=499154
Score = 111 bits (122), Expect = 2e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||||||||||||||| || | ||||| ||||| ||||||||||| | |
Sbjct 6159 GACTCCTTTTGAATGTTGTAATCTGAGAGTGTACGTCCATCCTCTAGTTGTTTACCAGCA 6100
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || | ||||||||| || || || ||||| ||||| ||| ||| |||||
Sbjct 6099 AAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTTGCTTTTACA 6040
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||| | | |||||| || | || | ||||| ||||| || || ||
Sbjct 6039 TTCTCTATTGTGTCACTTGGCTCCACTTCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTC 5980
Query 138601 ACAAAAATCTGCAT 138614
|||||||| |||||
Sbjct 5979 ACAAAAATTTGCAT 5966
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464
||| | ||||| | | || || ||||| ||||||||||| | || || |||||
Sbjct 5947 AACCAGATGTAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTTCGACCATCCTC 5888
Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524
||||||||||| | | |||| || | ||||||||| || || || ||||| |||||
Sbjct 5887 CAGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTG 5828
Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584
||| ||| ||||| | || | ||||| | | |||||| || | || | |||||
Sbjct 5827 GATCTTTGCTTTTACATTCTCTATTGTGTCACTTGGCTCCACTTCCAAAGTGATGGTTTT 5768
Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616
||||| || || || |||||||| |||||||
Sbjct 5767 TCCAGTGAGGGTCTTCACAAAAATTTGCATGG 5736
>seq5467
Length=66102
Score = 105 bits (116), Expect = 7e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| |||| ||| | ||| | |||| |||||||| || ||||||||
Sbjct 29821 CCTCCTCTCAATCGCAGAACCAGATGAAGAGTTGATTCCTTTTGGATATTGTAGTCAGAA 29880
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| ||||||||||| | | | || || | || ||||| || ||
Sbjct 29881 AGGGTCCGTCCATCCTCCAGTTGTTTACCTGCAAAAATGAGTCTTTGCTGGTCTGGTGGA 29940
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|||||||||||||| ||| |||||| ||||| | || | || || | | || ||
Sbjct 29941 ATACCTTCTTTGTC-TTGAATTTTTGCTTTTACATTCTCAATAGTATCACTAGGTTCTAC 29999
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616
|| | || | ||||| ||||| || ||||| ||||| ||||||||||
Sbjct 30000 TTCCAGAGTAATGGTTTTGCCAGTTAGGGTTTTCACAAAGATCTGCATGG 30049
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519
||||| || |||||||| | | | || || | ||||||||| || || || |||||||||
Sbjct 29665 TCCTCCAGCTGTTTACCTGCAAAAATCAGTCTCTGTTGGTCAGGTGGAATGCCTTCTTTG 29724
Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579
|| ||| ||| ||||| | || | ||||| | | |||||||| | || |
Sbjct 29725 TCTTGGATCTTTGCTTTTACATTCTCAATTGTGTCACTTGGTTCCACCTCCAAAGTGATA 29784
Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| ||||| || || || ||||||||||||||
Sbjct 29785 GTTTTTCCAGTGAGGGTCTTGACAAAAATCTGCAT 29819
>seq1267
Length=316221
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461
||| |||| ||| | | || || ||||||||||| ||||| || || || ||
Sbjct 206445 CAACACTAGATGAAGAGTAGATTCTTTTTGAATGTTATAGTCTGACAATGTGCGACCATC 206504
Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521
||| | ||||| || | | | |||| | ||||||||| || || || |||||||||||
Sbjct 206505 CTCCAACTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGAATTCCTTCTTTGTC 206564
Query 138522 GGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580
||| |||| | || | | ||| | |||||| | | |||||| || | || | |
Sbjct 206565 -TTGAATTTTGGCCTTGACATTTTCAATGGTGTCACTAGGCTCCACTTCCAGAGTGATAG 206623
Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| || || || ||||||||||| ||||||||
Sbjct 206624 TTTTTCCTGTTAGCGTTTTTACAAAGATCTGCAT 206657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494483342718960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |