Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_012959.1 Length=34920 Score E Sequences producing significant alignments: (Bits) Value seq70663 201 3e-47 seq73759 105 1e-18 >seq70663 Length=227 Score = 201 bits (222), Expect = 3e-47 Identities = 167/198 (84%), Gaps = 7/198 (4%) Strand=Plus/Plus Query 6015 CATCCATT-TGGTCAGAAAAGACTAtttttttATTGTCAAGCTTGGTGGCAAAGGAGCCA 6073 ||||||| |||||||||||||| || |||| ||||||||||||||||||| | || Sbjct 36 CATCCATCGTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGC-CCG 92 Query 6074 TAGAGGGCGTTGGAGAGAAGCTTGGCGATGGATCTCATGGTCTGATTTTTGTCACGGTCG 6133 |||||||||||||| || | |||||||||||| | || ||| || |||||| | || ||| Sbjct 93 TAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTTTG-CGCGATCG 151 Query 6134 GCGCGCTCCTTGGCCGCAATGTTGAGCTGGACATATTCGCGCGCAACGCACTTCCATTCG 6193 ||||||||||||||||| ||||| ||||| || |||||||||||||||||| ||||||| Sbjct 152 GCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCG 211 Query 6194 GGAAAAACAGTGGTGCGC 6211 || |||| ||||||||| Sbjct 212 GG--AAACGGTGGTGCGC 227 >seq73759 Length=212 Score = 105 bits (116), Expect = 1e-18 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 6455 TGCCAGTTGCGGGCGGCCAGGGCTCGCTCGCAGGGGTTCAGGGGCGGACCCCAGGGCATG 6514 ||||| ||||||||| || || |||||| | ||||| || || |||||||| |||||| Sbjct 61 TGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATG 120 Query 6515 GGATGCGTAAGCGCGGAGGCGTACATGCCGCAGATGTC 6552 || || || ||||||||||||||||||||||| ||||| Sbjct 121 GGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTC 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111242251289812