Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_015225.1 Length=35499 Score E Sequences producing significant alignments: (Bits) Value seq70663 230 5e-56 seq73759 129 1e-25 >seq70663 Length=227 Score = 230 bits (254), Expect = 5e-56 Identities = 186/218 (85%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 6022 GATGCCTTTGAGGAGGGCGGGGTCCATC-TGGTCGGCAAAGACAATCTTTTTGTTGTCGA 6080 ||||||||||||| | || | |||||| ||||| | |||||||||||||| |||| | Sbjct 17 GATGCCTTTGAGG-GTGCCGCATCCATCGTGGTCAGAAAAGACAATCTTTTG--TGTCAA 73 Query 6081 GCTTGGTGGCGAAGGACCCGTAGAGGGCGTTGGAGAGCAGCTTGGCGATGGAGCGCAGGG 6140 |||||||||| || | |||||||||||||||||| |||| |||||||||||||||||||| Sbjct 74 GCTTGGTGGCAAACG-CCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGG 132 Query 6141 TCTGGTTCTTGTCGCGGTCGGCGCGCTCCTTGGCGGCGATGTTGAGCTGCACGTACTCGC 6200 | ||||| ||| |||| ||||||||||||||||| |||||||| ||||||||||| |||| Sbjct 133 TTTGGTTTTTG-CGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGC 191 Query 6201 GCGCCAGGCAGCGCCATCGAGGAAAGACGGTGGTGCGC 6238 |||| | ||| |||||| |||| |||||||||||| Sbjct 192 GCGCAACGCACCGCCATTCGGGAA--ACGGTGGTGCGC 227 >seq73759 Length=212 Score = 129 bits (142), Expect = 1e-25 Identities = 135/174 (78%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 6422 CCGGGCGGCAGGCGGGGGTTAAAGTAGTCAATGG-GCGTTTGTGAGTCGTCCAGGGCGCG 6480 |||||| ||||||| | || |||||||| || || | || ||| || || | Sbjct 2 CCGGGCAGCAGGCGCGCGTCGAAGTAGTCTATCTTGCATCCTTGCA--GTCTAGCGCCTG 59 Query 6481 CTGCCAGTTCCGGGCGGCCAGCGCCCGCTCGTAGGGGTTGAGCGGCGGCCCCCAGGGCAT 6540 |||||| |||||||| ||||| |||||||| |||||||| || || ||||| ||||| Sbjct 60 CTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCAT 119 Query 6541 GGGGTGGGTGAGGGCCGAGGCGTACATGCCGCAGATGTCGTAGACGTAGAGGGG 6594 |||||||||||| || ||||||||||||||||| ||||| | |||| |||||| Sbjct 120 GGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGT-GAGGGG 172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113088741270226