Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2361 104 3e-17 >seq2361 Length=188731 Score = 104 bits (114), Expect = 3e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 154918 TTAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAA 154977 ||||| |||| || || | |||||||| ||||||| || || || | ||||| || | Sbjct 140319 TTAGAGAGATGTGCAATCTTGTTCATGAGTATGGTGGACAAGTGTACTTGGATGGGGCTA 140378 Query 154978 ATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATC 155037 | | ||||| ||||| ||| | | || | || ||||| |||||||| | ||| | Sbjct 140379 ACATGAATGCCCAGGTTGGATTGTGTAGGCCTGGAGACTATGGAGCAGATGTGTCTCACC 140438 Query 155038 TAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTA 155097 | || || || || ||||||||||| |||||||| || || || || || || || |||| Sbjct 140439 TGAATTTGCACAAGACATTCTGTATCCCACATGGTGGAGGTGGACCAGGTGTTGGCCCTA 140498 Query 155098 TAGGTGT 155104 | || || Sbjct 140499 TTGGAGT 140505 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 153288 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGA-AGCTTTATTCAATTACCA 153346 |||||||| || |||||||| ||| |||| |||||| | || ||||| || ||||| || Sbjct 69171 TACACTCCATACCAAGCTGAAATAGCTCAAGGAAGACTAGAGAGCTTG-TTGAATTATCA 69229 Query 153347 AACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGC 153406 ||| | || | || | || || | || ||||| || ||| |||||||||||| Sbjct 69230 AACAATGATAGCTGACTTGACTGGTCTGGACATTGCAAATGCTTCTTTATTAGATGAAGG 69289 Query 153407 AACTGCAGCAGCAGAAGCAATG 153428 ||| |||||||||||||| ||| Sbjct 69290 AACGGCAGCAGCAGAAGCTATG 69311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577136372793120