Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2361 118 1e-21 >seq2361 Length=188731 Score = 118 bits (130), Expect = 1e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 159595 AGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAAT 159654 ||| |||| || || ||||||||||| ||||||| || || || | ||||| || || Sbjct 140321 AGAGAGATGTGCAATCTTGTTCATGAGTATGGTGGACAAGTGTACTTGGATGGGGCTAAC 140380 Query 159655 CTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTA 159714 | ||||| ||||| || | | || | |||||||| |||||||| | ||| || Sbjct 140381 ATGAATGCCCAGGTTGGATTGTGTAGGCCTGGAGACTATGGAGCAGATGTGTCTCACCTG 140440 Query 159715 AACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATT 159774 || || || |||||||||||||| |||||||| || || || || || || || |||||| Sbjct 140441 AATTTGCACAAGACATTCTGTATCCCACATGGTGGAGGTGGACCAGGTGTTGGCCCTATT 140500 Query 159775 GGTGT 159779 || || Sbjct 140501 GGAGT 140505 Score = 96.9 bits (106), Expect = 4e-15 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 157963 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGA-AGCTTTATTCAATTACCA 158021 |||||||| || |||||||| ||| |||| |||||| | || ||||| || ||||| || Sbjct 69171 TACACTCCATACCAAGCTGAAATAGCTCAAGGAAGACTAGAGAGCTTG-TTGAATTATCA 69229 Query 158022 AACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGC 158081 ||| | || | || | || || || || ||||| || ||| |||||||||||| Sbjct 69230 AACAATGATAGCTGACTTGACTGGTCTGGACATTGCAAATGCTTCTTTATTAGATGAAGG 69289 Query 158082 AACTGCAGCAGCAGAAGCAATG 158103 ||| |||||||||||||| ||| Sbjct 69290 AACGGCAGCAGCAGAAGCTATG 69311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 585943087902480