Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1156 194 4e-44
seq4435 159 8e-34
seq1267 159 8e-34
seq5467 149 1e-30
>seq1156
Length=327524
Score = 194 bits (214), Expect = 4e-44
Identities = 170/212 (80%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
|||||| ||||||||||||||||| |||||||||||||| | || ||||| ||||||||
Sbjct 17701 AACAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCTGATAGTGTTCTTCCATCTTC 17642
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| ||||| || || | || ||||| || || ||||| |||||||| |||||
Sbjct 17641 TAGCTGCTTTCCTGCAAATATTAATCTCTGTTGATCAGGGGGAATTCCTTCTTTATCTTG 17582
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|||||| ||| || |||||||| ||||| | || ||||| | ||||| |||||
Sbjct 17581 GATTTTTGCCTTTACATTCTCAATAGTGTCACTAGGCTCTACTTCTAAGGTAATAGTCTT 17522
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
||||||||| |||||||| || | |||||||
Sbjct 17521 TCCTGTCAAGGTTTTTACAAAGATCTGCATTT 17490
>seq4435
Length=89394
Score = 159 bits (176), Expect = 8e-34
Identities = 171/225 (76%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| |||| || | |||||| || |||||||| || || || ||||| | |||||
Sbjct 36494 TCTGAGCCTCAGGACTAAGTGAAGTGTAGACTCTTTCTGGATGTTATAATCTGACAGAGT 36435
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|||||||||||| | ||| || ||||| ||||| | | ||||||||||| ||||| ||
Sbjct 36434 TCTCCCATCTTCTAACTGTTTTCCTGCAAAGATTAACCTCTGTTGGTCTGGTGGAATTCC 36375
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|||||| || || |||||| || || || ||||| ||||| ||| ||| |||||
Sbjct 36374 TTCTTTATCCTGGATTTTTGCTTTCACATTTTCAATAGTGTC---ACTGGGTTCAACTTC 36318
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| ||||| | |||||| ||||| | |||||
Sbjct 36317 GAGGGTTATAGTCTTGCCTGTAAGAGTTTTGACGAAGATCTGCAT 36273
Score = 131 bits (144), Expect = 4e-25
Identities = 163/221 (74%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCT 194981
||||||| ||| || || | ||| ||||| || |||||||||||||| | |||| || |
Sbjct 36034 AGTCTCAGAACCAGATGTAAAGTAGACTCCTTCTGAATATTGTAATCTGACAAG-GTACG 35976
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|||||||| | |||||| || || ||||| | || |||||| || || ||||| || ||
Sbjct 35975 TCCATCTTCCAACTGCTTTCCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATTCCCTC 35916
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
|| ||||| ||||| ||||||||||| |||||||| | || || || | ||
Sbjct 35915 CTTATCTTGGATTTTAGCTTTGACGTTCTCTATGGTGTCGCTAGGCTCTACCTCCAAAGT 35856
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
| ||||| ||||| | || ||||| || | |||||||
Sbjct 35855 GATTGTCTTGCCTGTTAGCGTCTTTACAAATATCTGCATTT 35815
Score = 131 bits (144), Expect = 4e-25
Identities = 163/222 (73%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||||| || | |||||| || || ||||| ||||| |||||||| | || |||||
Sbjct 36718 AGTCTCAGTACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCTGACAGGGTTCTT 36659
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| | ||||| || || || || | | ||||||||||||||| || || ||
Sbjct 36658 CCATCTTCCAATTGCTTCCCAGCAAAAATTAACCTTTGTTGGTCTGGAGGGATTCCCTCC 36599
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGG 195099
|| |||||||| || || || || || || || || ||| ||| || ||||||
Sbjct 36598 TTATCTTGAATCTTAGCTTTCACATTTTCGATTGTATC---ACTGGGTTCTACCTCAAGG 36542
Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| | || |||||||||| ||| || || || | |||||||
Sbjct 36541 GTGATGGTTTTTCCTGTCAGAGTCTTAACAAAAATTTGCATT 36500
Score = 127 bits (140), Expect = 5e-24
Identities = 153/207 (74%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| |||||||| || |||||||| ||||| | | || | |||||||| | |||
Sbjct 36248 GTGAAGTGTGGACTCCTTCTGAATATTATAATCTGATAAGGTGCGACCATCTTCCAACTG 36189
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| ||||| || || | || |||||| ||||| ||||| |||||||| |||||||||||
Sbjct 36188 TTTCCCTGCAAAAATCAATCTTTGTTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTT 36129
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113
|| || || ||||| || || ||| ||| ||||| || |||| || |||||
Sbjct 36128 GGCTTTTACATTTTCAATAGTATC---ACTGGGTTCAACTTCCAGAGTAATTGTTTTTCC 36072
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || || | ||||||
Sbjct 36071 AGTAAGTGTTTTAACAAAGATTTGCAT 36045
>seq1267
Length=316221
Score = 159 bits (176), Expect = 8e-34
Identities = 171/225 (76%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| |||| || | |||||| || ||||||||||||||||||||||| | | |||
Sbjct 205980 TCTGAGCCTCAGCACTAAGTGAAGTGTTGACTCTTTTTGAATATTGTAATCAGATAAAGT 206039
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | |||||| ||||| || || | | ||| ||||||||||| || ||
Sbjct 206040 TCTTCCATCTTCCAACTGCTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGAGGGATCCC 206099
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
||||| || || ||||| ||| ||||| ||||| ||||| ||| ||| |||||
Sbjct 206100 CTCTTTATCCTGGATTTTAGCCTTTACGTTTTCAATAGTGTC---ACTTGGTTCAACTTC 206156
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | || || ||||||| ||| || || || | |||||
Sbjct 206157 CAGGGTGATAGTTTTACCTGTCAGAGTCTTAACAAAGATCTGCAT 206201
Score = 154 bits (170), Expect = 3e-32
Identities = 170/225 (76%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| |||| || | |||||| || ||||||||||||||||||||||| | | |||
Sbjct 206208 TCTGAGCCTCAGCACTAAGTGAAGTGTTGACTCTTTTTGAATATTGTAATCAGATAAAGT 206267
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | |||||| ||||| || || | | || ||||||||||| || ||
Sbjct 206268 TCTTCCATCTTCCAACTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGAGGGATTCC 206327
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|||||||||||| || || ||| || || ||||| ||||| ||| ||| |||||
Sbjct 206328 TTCTTTGTCTTGGATCTTAGCCTTCACATTTTCAATTGTGTC---ACTGGGTTCAACTTC 206384
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||||| || || || || | ||||| || || | |||||
Sbjct 206385 TAGGGTAATGGTTTTGCCGGTAAGGGTTTTCACAAAGATCTGCAT 206429
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||||||||| || || |||||||| || ||||||||||| || || || | | || |
Sbjct 206439 GAGTCTCAACACTAGATGAAGAGTAGATTCTTTTTGAATGTTATAGTCTGACAATGTGCG 206498
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
||||| || | ||| || || || || || | || ||||||||||| ||||| |||||
Sbjct 206499 ACCATCCTCCAACTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGAATTCCTTC 206558
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||||||||||||| |||||| || ||||||||||| | |||||||| || ||
Sbjct 206559 TTTGTCTTGAATTTTGGCCTTGACATTTTCAATGGTGTCACTAGGCTCCACTTCCAGAGT 206618
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || |||||||| | |||||||| || | |||||
Sbjct 206619 GATAGTTTTTCCTGTTAGCGTTTTTACAAAGATCTGCAT 206657
Score = 120 bits (132), Expect = 7e-22
Identities = 161/220 (73%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCC 194983
|||||| || | ||| || || ||||| || || || || ||||| | |||| ||||| |
Sbjct 205758 TCTCAATACTAAGTGGAGGGTCGACTCCTTCTGTATGTTATAATCTGACAAG-GTTCTTC 205816
Query 194984 CATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTT 195043
|||| || || ||||| || || || || | | || ||||||||||| || || ||||
Sbjct 205817 CATCCTCCAGTTGCTTGCCAGCAAAAATTAACCTCTGCTGGTCTGGAGGGATCCCCTCTT 205876
Query 195044 TGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGG 195100
| || |||||||| ||| || || ||||| ||||| ||| ||| ||||| ||||
Sbjct 205877 TATCCTGAATTTTAGCCTTCACATTTTCAATAGTGTC---ACTTGGTTCAACTTCCAGGG 205933
Query 195101 TAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| | || || ||||||| ||| || || || | ||||||
Sbjct 205934 TGATGGTTTTACCTGTCAGAGTCTTAACAAAGATTTGCAT 205973
>seq5467
Length=66102
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | || || ||| || |||||||| || || ||||| |||||||| || | ||| ||
Sbjct 29826 TCTCAATCGCAGAACCAGATGAAGAGTTGATTCCTTTTGGATATTGTAGTCAGAAAGGGT 29885
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||| || || || |||||||| || || |||| ||| |||||||| ||||| ||
Sbjct 29886 CCGTCCATCCTCCAGTTGTTTACCTGCAAAAATGAGTCTTTGCTGGTCTGGTGGAATACC 29945
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||||||||||||||||||| || || |||||||| || || | ||| ||||| ||
Sbjct 29946 TTCTTTGTCTTGAATTTTTGCTTTTACATTCTCAATAGTATCACTAGGTTCTACTTCCAG 30005
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| || || || || | ||||| || || | |||||
Sbjct 30006 AGTAATGGTTTTGCCAGTTAGGGTTTTCACAAAGATCTGCAT 30047
Score = 134 bits (148), Expect = 3e-26
Identities = 163/221 (74%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||| | ||||| || | ||| || ||||| |||||||| ||||| | ||| || |
Sbjct 29602 AGTCTTAGGACAAGATGCAAAGTAGATTCTTTCTGAATATTATAATCAGAAAGGGTCCGT 29661
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| || ||||| |||||||| || || |||| |||||||| || ||||||||||||
Sbjct 29662 CCATCCTCCAGCTGTTTACCTGCAAAAATCAGTCTCTGTTGGTCAGGTGGAATGCCTTCT 29721
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGG 195099
|||||||| || ||| || || |||||||| ||||| ||| |||||| || |
Sbjct 29722 TTGTCTTGGATCTTTGCTTTTACATTCTCAATTGTGTC---ACTTGGTTCCACCTCCAAA 29778
Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || ||||| || | || || || || | |||||
Sbjct 29779 GTGATAGTTTTTCCAGTGAGGGTCTTGACAAAAATCTGCAT 29819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1105404770682231
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |