Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1866 219 3e-51 seq1100 185 7e-41 seq5467 147 2e-29 seq4435 141 7e-28 seq1351 141 7e-28 seq138 141 7e-28 seq1156 140 3e-27 seq1267 125 6e-23 seq629 114 1e-19 seq665 93.3 3e-13 >seq1866 Length=236777 Score = 219 bits (242), Expect = 3e-51 Identities = 433/636 (68%), Gaps = 10/636 (2%) Strand=Plus/Plus Query 551960 CACTATTGAAGTAGATTCATTATTTGAGGGAATTGA-TTATAATACGCCTATTTCGAGGG 552018 || ||| || | ||||| ||||| ||||| ||||| || || | | || || | | | Sbjct 76171 CAGTATCGAGATTGATTCGTTATTCGAGGGCATTGACTTCTATTCCACC-ATCACCCGAG 76229 Query 552019 CCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAG 552078 | |||||||| | ||||| ||||| | || |||| ||||||||| ||| Sbjct 76230 CTCGTTTTGAAGAGTTGAACTCTGACCTCTTCCGGGGCACCCTTGACCCAGTAGAAAAAG 76289 Query 552079 TTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGAT 552138 ||||||||| |||| || |||||| | |||| || || ||||||||||||||||| | Sbjct 76290 CCTTAAGAGATGCAAAAATGGATAAAGCTCAAGTTCACGAGATTGTGCTTGTTGGTGGTT 76349 Query 552139 CTACAAGAATTCCTAAAATTCGCGAAATGTT----AAGTTCTTATTTCAATGGTAAAAAA 552194 | || ||||||| ||||| | ||| || | | ||| ||||||||| ||| | Sbjct 76350 CAACCCGAATTCCAAAAAT--CCAAAAGCTTCTTCAGGATCT--TTTCAATGGAAAAGAT 76405 Query 552195 TTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT 552254 | || | ||| ||||||| || ||||||||||| |||||||| || | || || || Sbjct 76406 CTCAACAAGAGTATTAATCCCGACGAGGCTGTTGCATATGGTGCTGCCGTGCAGGCTGCA 76465 Query 552255 ATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCT 552314 || | ||| | | ||| | | ||| | | |||| | ||||| || ||| Sbjct 76466 ATCTTGAGTGGTGATAAGTCTGAGCAGGTCCAAGACTTGCTACTGCTTGATGTCACGCCT 76525 Query 552315 CTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACT 552374 || || || || | || || | ||||||| | ||||| | || || | | || ||| Sbjct 76526 CTGTCCCTGGGAATTGAGACTGCTGGAGGTGTCATGACCACCCTAATAAAACGGAACACT 76585 Query 552375 ACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTT 552434 || |||||| || | | | |||| | || ||||||||||| || ||| || Sbjct 76586 ACAATTCCTACTAGGCAGACCCAGACATTTACAACATATTCAGATAACCAGCCTGGGGTG 76645 Query 552435 ACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACT 552494 |||||| | | || || ||| | | ||||| || ||||| | ||| || | Sbjct 76646 CTTATTCAAGTGTACGAGGGTGAACGTGCCATGACTAAGGACAATAACCTACTAGGAAAA 76705 Query 552495 TTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTC 552554 ||| | || | |||||||||||||||||||||||||| || || ||||| || || || Sbjct 76706 TTTGAGTTGGGTGGTATTCCTCCTGCTCCTCGTGGAGTCCCACAGATTGAGGTCACATTT 76765 Query 552555 GATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 ||||| || || ||||| || ||||||| ||||| Sbjct 76766 GATATAGACGCTAATGGCATCATGAATGTCTCTGCT 76801 Score = 134 bits (148), Expect = 1e-25 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 550322 CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTT 550381 |||||| ||||||| ||||||||||| | |||||||| ||| ||| |||| || Sbjct 74991 CCAGAAGAAATTTCTTCTATGGTTTTGACTAAAATGAAGGAAATAGCTGAAGCTTAC-TT 75049 Query 550382 GGTCAAGAAGTTA-CGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACG 550440 || ||||| || | |||| || || |||||||| ||||| || |||||||| || || Sbjct 75050 GGGAAAGAACATATCAAATGCCGTCATCACTGTACCTGCATACTTCAATGACTCCCAGCG 75109 Query 550441 TCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGA 550500 || || ||||| ||||||||| ||| |||| | || || ||||| || |||||||| Sbjct 75110 GCAGGCCACTAAGGATGCTGGAACCATTTCTGGGTTAAACGTACTTCGAATAATCAATGA 75169 Query 550501 ACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||| || ||||| || | || ||||| || || || Sbjct 75170 ACCAACGGCTGCAGCCATAGCCTATGGTCTAGACAA 75205 >seq1100 Length=342783 Score = 185 bits (204), Expect = 7e-41 Identities = 538/817 (66%), Gaps = 26/817 (3%) Strand=Plus/Plus Query 551780 AGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTAT--CA 551837 ||| ||| ||| ||| | ||||| ||||| || || |||||||| || |||| || Sbjct 4092 AGCCACTGCTGGTGATACACATCTGGGTGGTGAGGACTTTGATAACAGGATGGTTAGCCA 4151 Query 551838 TGGTGTGTTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCT 551897 | |||| ||||| || || |||| ||||| ||||| | | | ||| Sbjct 4152 TTTTGTG--GAAGAGTTCAAGAGAAAGCACAAAAAGGATCTGCACAAGAGTCCTCGTGCT 4209 Query 551898 CTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAA 551957 ||||| | || || |||||||||||||||||||| ||| | || || |||| || Sbjct 4210 CTTCGGAGACTGAGGACTGCTTGCGAAAGAGCCAAGCGAACACTGTCCAGCAGTACAGAA 4269 Query 551958 ACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG-AG 552016 | ||||||| | || | | ||||| || ||||| | | | || | | | | Sbjct 4270 GCTTCTATTGAGATTGACGCCCTCTTTGAAGGCATTGACTTCTACA-GCAAAATCAGCCG 4328 Query 552017 GGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACA 552076 |||| |||||||| | ||| || || ||| || ||| | ||||| || || | Sbjct 4329 TGCCAGGTTTGAAGAACTGTGTATGGACCTGTTTCGAGGTACACTGGAACCTGTTGAGCG 4388 Query 552077 AGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGG 552136 || | | ||| | ||||| || || | | | |||||| || |||||||| || Sbjct 4389 AGCTCTTTCTGATGCCAAGATGGACAAGAGTAGAATTAGTGAAATAGTTCTTGTTGGAGG 4448 Query 552137 ATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATT 552196 ||| || | || || || || | | |||||| || |||||||||||| | | Sbjct 4449 ATCCACTCGGATCCCCAAGATCCAGAAGTTGTTAAAGGATTTCTTCAATGGTAAAGA--T 4506 Query 552197 AAATGAAAGT--GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT 552254 ||| | || | ||||| || || ||||| |||||||| || ||| |||| ||||| Sbjct 4507 CTATGTATGTCGATCAATCCTGACGAAGCTGTGGCCTATGGAGCTGCAGTTCAGGCAGCC 4566 Query 552255 ATTCTTTCTGGACAAAC---TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACT 552311 | | ||| | || | || || | | | | | ||| || |||||||| | Sbjct 4567 GTGTTGAGTGGTGATACCAGTCAT-AATATCAAGGACGTGTTG--CTCGTAGATGTAGCA 4623 Query 552312 CCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAAT 552371 ||| | ||||||||| | || || | |||||| | ||||| || || | || ||||| Sbjct 4624 CCTTTGTCTCTTGGTATCGAGACTGCTGGAGGAGTAATGACCAAAATTGTAGAACGAAAT 4683 Query 552372 ACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCT 552431 | | |||||||| || | |||| || ||| | || ||||| || || ||| ||| Sbjct 4684 TCCAGAATTCCTTGCAAGACCTCTCAGGTTTTTACAACCTATTCTGACAACCAACCTGGA 4743 Query 552432 GTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT--- 552488 || ||||| ||| | ||||| || || ||| | | || ||||| || | |||| Sbjct 4744 GTGACAATCCAAGTATTTGAGGGGGAGAGAGCAATGACCAAAGACAA----CCACTTGTT 4799 Query 552489 --GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAG 552546 || | ||| || | | ||||| ||||| || |||||||| || || |||||||| | Sbjct 4800 GGGGAAGTTTGAACTGA-TGGGTATACCTCCAGCACCTCGTGGTGTGCCTCAAATTGAGG 4858 Query 552547 TTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 | ||||| || || ||||| || || ||| || |||| Sbjct 4859 TGACTTTTGACATTGATGCAAACGGCATTCTGCATGT 4895 Score = 178 bits (196), Expect = 1e-38 Identities = 373/554 (67%), Gaps = 8/554 (1%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || ||||| || | || || || || |||||| || || | | || || || Sbjct 3444 AGCGATTGGTATTGACCTCGGCACAACTTACTCTTGTGTGGGAGTGTTCGAGAACGGAAA 3503 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| || || |||||||||||||||||||||||||| || ||| ||| ||| | || || Sbjct 3504 AGTCGAGATCATTGCCAATGATCAAGGTAACAGAACAACACCAAGTTACGTTGCCTTTAC 3563 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || || | || |||| ||||||||||||| || | || ||||| || Sbjct 3564 AGACACAGAGCGATTGATTGGAGATGCAGCAAAATCCCAGGTATCTCTGAATCCCGAGAA 3623 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 | | ||||| || || | | || || | | | | ||||| | | | || Sbjct 3624 CTCAGTATTTGACGCCAAGAGACTCATCGGCCGTCGGTATGATGATCCAAAGATCCAACA 3683 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 ||| ||||||| ||||||||| | || ||| || || || | | ||| Sbjct 3684 AGACCTGAAGCACTGGCCTTTCACCGTCGTAAATCAGGGCGGTAAGCCAAAAGTGAAAGT 3743 Query 550291 TACTCATGAAGGATCTGTTAAACAA--TTTTCA--CCAGAACAAATTTCATCTATGGTTT 550346 | | | |||| | ||| || | |||| || ||| |||| |||||||| Sbjct 3744 TTCATTTAAAGG----GGAAAATAAGCTATTCAATCCTGAAGAAATCAGTGCTATGGTTC 3799 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 ||| || |||||| ||||||| || | | |||| || || | |||||||||| Sbjct 3800 TAACAAAGATGAAAGAAACAGCTGAAGCCTATCTTGGCCAGCCGGTGAAAGATGCAGTAA 3859 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || || ||||| || |||||||| || || | |||||||| |||||||||||| || Sbjct 3860 TCACAGTTCCAGCTTACTTTAATGATTCTCAGAGACAAGCTACCAAAGATGCTGGAGCTA 3919 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 | | ||||||||||| || | ||||| |||||||| || |||||||| | ||||| | Sbjct 3920 TCACAGGACTTAATGTACTGAGAATTATAAATGAACCAACAGCTGCTGCCTTAGCATACG 3979 Query 550527 GACTTGATAAACAT 550540 | || |||||| || Sbjct 3980 GTCTCGATAAAAAT 3993 >seq5467 Length=66102 Score = 147 bits (162), Expect = 2e-29 Identities = 171/226 (76%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 563260 CGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTCTTG 563317 || || || |||||||| || ||| ||||| |||||||| |||| || || | | Sbjct 29833 CGCAGAACCAGATGAAGAGTTGATTCCTTTTGG--ATATTGTAGTCAGAAAGGGTCCGTC 29890 Query 563318 AATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTT 563377 ||| || |||||||| || |||||||| ||||||||||| || || ||||| ||||||| Sbjct 29891 CATCCTCCAGTTGTTTACCTGCAAAAATGAGTCTTTGCTGGTCTGGTGGAATACCTTCTT 29950 Query 563378 TATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGT-GTGAGTACATTCGAGAGTA 563436 | |||||||||||| |||||| |||||| |||||| | | ||| ||| |||||| Sbjct 29951 TGTCTTGAATTTTTGCTTTTACATTCTCAATAGTATCACTAGGTTCTAC-TTCCAGAGTA 30009 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATAGACATCT 563482 | ||||| ||||| || ||||| || || || ||||| | |||| Sbjct 30010 ATGGTTTTGCCAGTTAGGGTTTTCACAAAGATCTGCATGGTGATCT 30055 >seq4435 Length=89394 Score = 141 bits (156), Expect = 7e-28 Identities = 141/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 |||||| ||||| | || || | |||||| | ||||| || |||||||| | ||| Sbjct 36227 AATATTATAATCTGATAAGGTGCGACCATCTTCCAACTGTTTCCCTGCAAAAATCAATCT 36168 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 ||| ||||| || |||||||||||||||||||||||||| |||||| ||||| || Sbjct 36167 TTGTTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGT 36108 Query 563412 ATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| || | | ||| ||||||| ||||| |||||||| |||||||| || ||||| Sbjct 36107 ATCACTGGGTTCAACTTCCAGAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAGATTTG 36048 Query 563472 CAT 563474 ||| Sbjct 36047 CAT 36045 Score = 127 bits (140), Expect = 2e-23 Identities = 138/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 |||||| ||||| | || || | |||||| | |||||| || |||||||| | ||| Sbjct 32837 AATATTATAATCTGATAAGGTGCGCCCATCTTCTAATTGTTTCCCTGCAAAAATCAATCT 32778 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 ||| ||||| || ||||||||||||||||| || |||||| ||| || ||||| || Sbjct 32777 TTGTTGATCTGGTGGAATTCCTTCTTTATCCTGGATTTTTGCTTTCACGTTTTCAATAGT 32718 Query 563412 ATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| || | | |||||| || | ||| || || ||||||||||| ||||| || || Sbjct 32717 ATCACTGGGTTCAACTTCGAGGGTTATAGTCTTGCCTGTAAGAGTTTTGACGAAGATCTG 32658 Query 563472 CAT 563474 ||| Sbjct 32657 CAT 32655 Score = 120 bits (132), Expect = 2e-21 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 ||||| | |||||||| |||||| ||| |||||||| | || |||||| |||| Sbjct 36712 AGTACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCTGACAGGGTTCTTCCATCT 36653 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || | ||| || || |||||||| | ||||| || || ||||| ||||| || |||||| Sbjct 36652 TCCAATTGCTTCCCAGCAAAAATTAACCTTTGTTGGTCTGGAGGGATTCCCTCCTTATCT 36593 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTG-AGTACATTCGAGAGTAACAGT 563441 ||||| || ||| || || ||||||||| || | ||| || || || | || Sbjct 36592 TGAATCTTAGCTTTCACATTTTCGATTGTATCACTGGGTTCTAC-CTCAAGGGTGATGGT 36534 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| || || ||||| ||||| ||||||||||| Sbjct 36533 TTTTCCTGTCAGAGTCTTAACAAAAATTTGCAT 36501 Score = 114 bits (126), Expect = 1e-19 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||| | || || | ||||| ||| ||||| || || ||||| | |||||| Sbjct 36493 CTGAGCCTCAGGACTAAGTGAAGTGTAGACTCTTTCTGGATGTTATAATCTGACAGAGTT 36434 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || |||||| | |||||||| ||||| || | || || || || || ||||||||| Sbjct 36433 CTCCCATCTTCTAACTGTTTTCCTGCAAAGATTAACCTCTGTTGGTCTGGTGGAATTCCT 36374 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 |||||||| || |||||| ||| || ||||| || ||| || | | |||||| Sbjct 36373 TCTTTATCCTGGATTTTTGCTTTCACATTTTCAATAGTGTCACTGGGTTCAACTTCGAGG 36314 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||| || || ||||||||||| ||||| || ||||| Sbjct 36313 GTTATAGTCTTGCCTGTAAGAGTTTTGACGAAGATCTGCAT 36273 >seq1351 Length=294006 Score = 141 bits (156), Expect = 7e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 550307 GTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACA 550366 || ||| ||||| || || ||||||| ||||||||||||| || ||||| ||| Sbjct 248317 GTCAAATCATTTTACCCTGAGGAAATTTCTTCTATGGTTTTAACTAAGATGAAGGAAATT 248258 Query 550367 GCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTT 550425 || || | | | || |||| | | | |||| ||||| |||||||| || || || Sbjct 248257 GCAGAGGCATATTTAGGG-AAGACAATCTCAAATGCTGTAATCACTGTACCTGCCTACTT 248199 Query 550426 TAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCT 550485 |||||||| || || || ||||| || ||||||||| ||| ||||| | ||||| || Sbjct 248198 CAATGACTCCCAGCGGCAGGCTACGAAGGATGCTGGAACCATTTCTGGAATGAATGTACT 248139 Query 550486 TCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 |||||| || ||||||||||| ||||| || |||| ||||| || |||||| Sbjct 248138 TCGTATAATTAATGAACCTACAGCTGCAGCTATTGCGTATGGCCTAGATAAA 248087 Score = 134 bits (148), Expect = 1e-25 Identities = 207/290 (71%), Gaps = 8/290 (3%) Strand=Plus/Minus Query 551964 ATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAA 552023 ||||| |||| || || ||||| || |||| | || | ||||| | | || Sbjct 244766 ATTGAGATAGACTCTTTGTTTGAAGGGGTTGACTTCTATTCAACTATTACACGAGCTCGT 244707 Query 552024 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT-TTT 552082 |||||||| | |||||| ||||| || || |||||||||| ||| |||| ||| Sbjct 244706 TTTGAAGAATTGAATTCTGACCTCTTCCGAGGCACTCTTGAACCAGTTGAA-AAGTCTTT 244648 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 || ||| ||||| | |||||| |||| ||||| ||||||||||| ||||||||||| Sbjct 244647 GAGGGATGCAAAGCTAGATAAAAGTCAAGTTCATGATATTGTGCTTGTAGGTGGATCTAC 244588 Query 552143 AAGAATTCCTAAAATTCGCGAAA---TGTTAAGTTCTTATTTCAATGGTAAAAAATTAAA 552199 ||||| || ||||| | ||| | || || || |||| ||||||| | | || Sbjct 244587 CAGAATCCCAAAAAT--CCAAAAGCTTCTTCAG-GATTTCTTCAGTGGTAAAGATCTGAA 244531 Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAG 552249 ||||| | ||||| ||||| |||||||| |||||||| || |||||| Sbjct 244530 CAAAAGTATCAATCCTGATGAAGCTGTTGCATATGGTGCAGCTGTTCAAG 244481 Score = 129 bits (142), Expect = 5e-24 Identities = 291/432 (67%), Gaps = 7/432 (2%) Strand=Plus/Minus Query 552290 TATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTAT 552349 ||||| ||| |||||||||| || || || | ||| | ||||||| ||||| | || Sbjct 243803 TATTG--CTTCTAGATGTTACACCCCTTTCCTTGGGTATTGAAACAGCAGGAGGAGTAAT 243746 Query 552350 GACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTAC 552409 ||| | ||||||| | | || ||||| || || | || | | |||| | || Sbjct 243745 GACCACTCTTATCAAACGCAACACTACCATCCCAACCCGACAAACCCAGACATTTACAAC 243686 Query 552410 GTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCAC 552469 ||||| ||||| ||| | | ||| || ||| | | ||||| ||| | | || Sbjct 243685 ATATTCGGATAACCAACCAGGTGTGCTTATCCAAGTGTACGAAGGTGAACGTGCCATGAC 243626 Query 552470 TAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGG 552529 ||| || ||||| | | || | ||| | ||| ||||| ||||| || ||||| || Sbjct 243625 TAAGGACAATAACCTGTTGGGCAAGTTTGAGTTAACTGGTATACCTCCAGCACCTCGAGG 243566 Query 552530 AGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 ||| || || || |||||||| || ||||| ||||||||||| ||| ||||||| ||||| Sbjct 243565 AGTTCCTCAGATCGAAGTTACCTTTGATATAGATGCCAATGGCATTATGAATGTCACTGC 243506 Query 552590 TTGTGATAA-ATC-TAGCAACAAGAGTAAAAATATTACTNNNNNNNATAATCGTGGTAGA 552647 | ||||| | | || || ||||| || || || ||| || | ||| | Sbjct 243505 TGTGGATAAGAGCACAGGAA-AAGAG-AATAAGATCACTATTACTAATGACAAGGGTCGT 243448 Query 552648 TTTACTGATGAACAAATTAAACGTATGGTCGAAGAAGCTAAAGAATTTGAAGAAGCTGAT 552707 | || | ||| |||| || | ||||| |||||||| || | | | ||||| |||| Sbjct 243447 CTGTCTAAAGAAGAAATAGAAAGAATGGTAAAAGAAGCTGAAAATTATAGAGAAGATGAT 243388 Query 552708 -AATAAGAGAAA 552718 || || ||||| Sbjct 243387 GAAAAACAGAAA 243376 Score = 113 bits (124), Expect = 4e-19 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| ||||| ||||| |||||||||||| |||||| || || | || |||| || Sbjct 249038 AGCTATCGGTATTGATTTGGGAACCACATATTCTTGTGTGGGAGTGTTCCAGCATGGAAA 248979 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||| || || ||||||||||| ||| | |||||||| |||||| | || || Sbjct 248978 AGTAGAAATAATAGCTAATGATCAAGGAAACCGCACTACTCCCAGTTATGTAGCATTTAC 248919 Query 550111 GGAAACTG-AACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTAC 550167 || || | || | ||| |||| |||||||| ||| | || | || || || |||| Sbjct 248918 AGATACAGAAAGACTTA-TTGGGGATGCAGCTAAAAACCAGGTTGCAATG--AACCCTAA 248862 Query 550168 CAATACTATTTTTG 550181 |||||| | |||| Sbjct 248861 TAATACTGTATTTG 248848 >seq138 Length=1029753 Score = 141 bits (156), Expect = 7e-28 Identities = 252/365 (69%), Gaps = 2/365 (1%) Strand=Plus/Plus Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAG 550232 |||| | ||||||||||| | ||||| ||| | ||||| | |||||| ||| Sbjct 911107 CTATGATAGATGCTAAACGACTTATTGGTCGAAAATGGGATGATCCAACTGTTGCTTCAG 911166 Query 550233 ATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTA 550292 | ||||| || ||||| ||| | | || | | |||| ||||| | || | | | Sbjct 911167 ACATGAAACACTGGCCCTTCGATGTCACCAACGATGCTGGTAAACCAAAAATCCAGGTTG 911226 Query 550293 CTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGA 550352 || | || ||| ||||| || ||| |||| || || |||||| | | | Sbjct 911227 AGTATAAGGGGGAGAACAAAACATTTTATCCTGAAGAAATCTCTTCAATGGTTCTTACCA 911286 Query 550353 AAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACT 550411 | |||||| || || |||| |||| |||| || || |||| ||| | || Sbjct 911287 AGATGAAAGAAGTGGCTGAAGCTTACCTTGGG-AAGACTGTCACAAATGCCGTAGTCACC 911345 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || ||||| |||||||||||||| || ||||| || || ||||||||||| |||||| Sbjct 911346 GTTCCAGCCTATTTTAATGACTCCCAGCGTCAGGCAACCAAAGATGCTGGCACAATTGCT 911405 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 || | |||||| | ||||| || |||||||| || ||||| ||| |||||||||||||| Sbjct 911406 GGTATGAATGTTTTACGTATCATTAATGAACCAACAGCTGCAGCAATTGCATATGGACTT 911465 Query 550532 GATAA 550536 || || Sbjct 911466 GACAA 911470 Score = 120 bits (132), Expect = 2e-21 Identities = 122/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || ||||| || | || || || || |||||| || || | ||| ||||||| Sbjct 910348 AGCAATCGGTATTGACCTTGGTACAACCTACTCTTGTGTGGGAGTGTTTCAACATGGTAA 910407 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||| ||||||||||||||||| |||||||| || || ||||| | ||||| Sbjct 910408 AGTTGAAATAATTGCCAATGATCAAGGAAACAGAACAACCCCCAGCTATGTAGCATTCAC 910467 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA 550149 || || |||| ||| ||||||||||||| ||| |||| Sbjct 910468 AGATACAGAACGTTTGATTGGTGATGCAGCCAAAAATCA 910506 >seq1156 Length=327524 Score = 140 bits (154), Expect = 3e-27 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || ||||||||||| || ||||| |||||||||||| | ||| |||||| Sbjct 17709 AGACGTAGAACAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCTGATAGTGTTCTT 17650 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || || ||||| ||||| || | ||| || |||||||| |||||||||||| Sbjct 17649 CCATCTTCTAGCTGCTTTCCTGCAAATATTAATCTCTGTTGATCAGGGGGAATTCCTTCT 17590 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGT-GTGAGTACATTCGAGAGT 563435 |||||||| |||||| ||||| |||||| || ||| | | ||| ||| | || Sbjct 17589 TTATCTTGGATTTTTGCCTTTACATTCTCAATAGTGTCACTAGGCTCTAC-TTCTAAGGT 17531 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || ||| || || || | ||||| || || || ||||| Sbjct 17530 AATAGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 17492 >seq1267 Length=316221 Score = 125 bits (138), Expect = 6e-23 Identities = 166/225 (74%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311 ||||| | || || | ||||| || ||| | |||| |||||||||||||| || || Sbjct 205981 CTGAGCCTCAGCACTAAGTGAAGTGTTGACTCTTTTTG--AATATTGTAATCAGATAAAG 206038 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 ||||| |||||| | || ||||| |||||||| | |||||||| || ||||| || | Sbjct 206039 TTCTTCCATCTTCCAACTGCTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGAGGGATCC 206098 Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTC 563429 | |||||||| || ||||| ||||| ||||| || ||| | || || || ||| Sbjct 206099 CCTCTTTATCCTGGATTTTAGCCTTTACGTTTTCAATAGTGTCACT-TG-GTTCAACTTC 206156 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || | ||||||||| || ||||| ||||| || || ||||| Sbjct 206157 CAGGGTGATAGTTTTACCTGTCAGAGTCTTAACAAAGATCTGCAT 206201 Score = 122 bits (134), Expect = 7e-22 Identities = 162/223 (73%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311 ||||| | || || | ||||| || ||| | |||| |||||||||||||| || || Sbjct 206209 CTGAGCCTCAGCACTAAGTGAAGTGTTGACTCTTTTTG--AATATTGTAATCAGATAAAG 206266 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 ||||| |||||| | || ||||| |||||||| | || ||||| || ||||| |||| Sbjct 206267 TTCTTCCATCTTCCAACTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGAGGGATTC 206326 Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGA 563431 ||||||| ||||| || || || || |||||||| ||| || | | ||| | Sbjct 206327 CTTCTTTGTCTTGGATCTTAGCCTTCACATTTTCAATTGTGTCACTGGGTTCAACTTCTA 206386 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | |||| ||||| || ||||| ||||| || || || ||||| Sbjct 206387 GGGTAATGGTTTTGCCGGTAAGGGTTTTCACAAAGATCTGCAT 206429 Score = 93.3 bits (102), Expect = 3e-13 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 || |||||||| ||| |||||| ||| || || || | | || | ||| || Sbjct 206449 ACTAGATGAAGAGTAGATTCTTTTTGAATGTTATAGTCTGACAATGTGCGACCATCCTCC 206508 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 | |||||||| |||||||| | ||| || || || || |||||||||||||| |||||| Sbjct 206509 AACTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGAATTCCTTCTTTGTCTTGA 206568 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTT 563444 ||||| || || ||||| || ||| | | | || ||| ||||| | |||||| Sbjct 206569 ATTTTGGCCTTGACATTTTCAATGGTGTCACT-AGGCTCCACTTCCAGAGTGATAGTTTT 206627 Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || ||||| || || || ||||| Sbjct 206628 TCCTGTTAGCGTTTTTACAAAGATCTGCAT 206657 >seq629 Length=499154 Score = 114 bits (126), Expect = 1e-19 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 || ||||| |||||| |||||| || ||||| |||| || |||| ||| || Sbjct 5946 ACCAGATGTAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTTCGACCATCCTCC 5887 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 |||||||| || ||||| || ||||| || || ||||| || || ||||| || ||||| Sbjct 5886 AGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGG 5827 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTT 563444 || ||| |||||| ||| ||||| ||| | || | || ||| | ||| | ||||| Sbjct 5826 ATCTTTGCTTTTACATTCTCTATTGTGTCACT-TGGCTCCACTTCCAAAGTGATGGTTTT 5768 Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| || || || || ||||||||||| Sbjct 5767 TCCAGTGAGGGTCTTCACAAAAATTTGCAT 5738 Score = 105 bits (116), Expect = 5e-17 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 |||||||| | ||| || || ||| |||||||| | || || | | ||| || Sbjct 6174 ACAAGATGCAAAGTAGACTCCTTTTGAATGTTGTAATCTGAGAGTGTACGTCCATCCTCT 6115 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 |||||||| || ||||| || ||||| || || ||||| || || ||||| || ||||| Sbjct 6114 AGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGG 6055 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTT 563444 || ||| |||||| ||| ||||| ||| | || | || ||| | ||| | ||||| Sbjct 6054 ATCTTTGCTTTTACATTCTCTATTGTGTCACT-TGGCTCCACTTCCAAAGTGATGGTTTT 5996 Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| || || || || ||||||||||| Sbjct 5995 TCCAGTGAGGGTCTTCACAAAAATTTGCAT 5966 >seq665 Length=482145 Score = 93.3 bits (102), Expect = 3e-13 Identities = 132/183 (72%), Gaps = 12/183 (7%) Strand=Plus/Plus Query 550026 GTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAA 550085 |||||||||||| | ||||||| |||||||| ||||| || ||||| |||||||||| Sbjct 78468 GTGTTGGTGTTTTTAAGAATGGTAGGGTTGAAATCATTGCTAACGATCAGGGTAACAGAA 78527 Query 550086 CTACTCCATCTTATGTTTCTTTCACG---GAAACTGAACATTTAGTTGGTGATGCAGCAA 550142 ||| || ||||| ||| | |||||| || ||||| | | || |||||||||| Sbjct 78528 TTACGCCGTCTTACGTTGCCTTCACGCCCGATGGTGAACGGCTCATCGGAGATGCAGCAA 78587 Query 550143 AATATCAAGCCACTGGTAATCCTACC-----AATACTATTTTTGATGCTAAACGTTTAAT 550197 || || | |||| || || ||| || || | |||||||| |||||||| || Sbjct 78588 AA---AAATCAACTGACAA-CCAACCCCGAGAACACGGTATTTGATGCCAAACGTTTGAT 78643 Query 550198 TGG 550200 || Sbjct 78644 AGG 78646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4014129092723570