Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq1866 219 3e-51
seq1100 185 7e-41
seq5467 147 2e-29
seq4435 141 7e-28
seq1351 141 7e-28
seq138 141 7e-28
seq1156 140 3e-27
seq1267 125 6e-23
seq629 114 1e-19
seq665 93.3 3e-13
>seq1866
Length=236777
Score = 219 bits (242), Expect = 3e-51
Identities = 433/636 (68%), Gaps = 10/636 (2%)
Strand=Plus/Plus
Query 551960 CACTATTGAAGTAGATTCATTATTTGAGGGAATTGA-TTATAATACGCCTATTTCGAGGG 552018
|| ||| || | ||||| ||||| ||||| ||||| || || | | || || | | |
Sbjct 76171 CAGTATCGAGATTGATTCGTTATTCGAGGGCATTGACTTCTATTCCACC-ATCACCCGAG 76229
Query 552019 CCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAG 552078
| |||||||| | ||||| ||||| | || |||| ||||||||| |||
Sbjct 76230 CTCGTTTTGAAGAGTTGAACTCTGACCTCTTCCGGGGCACCCTTGACCCAGTAGAAAAAG 76289
Query 552079 TTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGAT 552138
||||||||| |||| || |||||| | |||| || || ||||||||||||||||| |
Sbjct 76290 CCTTAAGAGATGCAAAAATGGATAAAGCTCAAGTTCACGAGATTGTGCTTGTTGGTGGTT 76349
Query 552139 CTACAAGAATTCCTAAAATTCGCGAAATGTT----AAGTTCTTATTTCAATGGTAAAAAA 552194
| || ||||||| ||||| | ||| || | | ||| ||||||||| ||| |
Sbjct 76350 CAACCCGAATTCCAAAAAT--CCAAAAGCTTCTTCAGGATCT--TTTCAATGGAAAAGAT 76405
Query 552195 TTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT 552254
| || | ||| ||||||| || ||||||||||| |||||||| || | || || ||
Sbjct 76406 CTCAACAAGAGTATTAATCCCGACGAGGCTGTTGCATATGGTGCTGCCGTGCAGGCTGCA 76465
Query 552255 ATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCT 552314
|| | ||| | | ||| | | ||| | | |||| | ||||| || |||
Sbjct 76466 ATCTTGAGTGGTGATAAGTCTGAGCAGGTCCAAGACTTGCTACTGCTTGATGTCACGCCT 76525
Query 552315 CTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACT 552374
|| || || || | || || | ||||||| | ||||| | || || | | || |||
Sbjct 76526 CTGTCCCTGGGAATTGAGACTGCTGGAGGTGTCATGACCACCCTAATAAAACGGAACACT 76585
Query 552375 ACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTT 552434
|| |||||| || | | | |||| | || ||||||||||| || ||| ||
Sbjct 76586 ACAATTCCTACTAGGCAGACCCAGACATTTACAACATATTCAGATAACCAGCCTGGGGTG 76645
Query 552435 ACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACT 552494
|||||| | | || || ||| | | ||||| || ||||| | ||| || |
Sbjct 76646 CTTATTCAAGTGTACGAGGGTGAACGTGCCATGACTAAGGACAATAACCTACTAGGAAAA 76705
Query 552495 TTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTC 552554
||| | || | |||||||||||||||||||||||||| || || ||||| || || ||
Sbjct 76706 TTTGAGTTGGGTGGTATTCCTCCTGCTCCTCGTGGAGTCCCACAGATTGAGGTCACATTT 76765
Query 552555 GATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590
||||| || || ||||| || ||||||| |||||
Sbjct 76766 GATATAGACGCTAATGGCATCATGAATGTCTCTGCT 76801
Score = 134 bits (148), Expect = 1e-25
Identities = 161/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 550322 CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTT 550381
|||||| ||||||| ||||||||||| | |||||||| ||| ||| |||| ||
Sbjct 74991 CCAGAAGAAATTTCTTCTATGGTTTTGACTAAAATGAAGGAAATAGCTGAAGCTTAC-TT 75049
Query 550382 GGTCAAGAAGTTA-CGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACG 550440
|| ||||| || | |||| || || |||||||| ||||| || |||||||| || ||
Sbjct 75050 GGGAAAGAACATATCAAATGCCGTCATCACTGTACCTGCATACTTCAATGACTCCCAGCG 75109
Query 550441 TCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGA 550500
|| || ||||| ||||||||| ||| |||| | || || ||||| || ||||||||
Sbjct 75110 GCAGGCCACTAAGGATGCTGGAACCATTTCTGGGTTAAACGTACTTCGAATAATCAATGA 75169
Query 550501 ACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536
||| || ||||| || | || ||||| || || ||
Sbjct 75170 ACCAACGGCTGCAGCCATAGCCTATGGTCTAGACAA 75205
>seq1100
Length=342783
Score = 185 bits (204), Expect = 7e-41
Identities = 538/817 (66%), Gaps = 26/817 (3%)
Strand=Plus/Plus
Query 551780 AGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTAT--CA 551837
||| ||| ||| ||| | ||||| ||||| || || |||||||| || |||| ||
Sbjct 4092 AGCCACTGCTGGTGATACACATCTGGGTGGTGAGGACTTTGATAACAGGATGGTTAGCCA 4151
Query 551838 TGGTGTGTTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCT 551897
| |||| ||||| || || |||| ||||| ||||| | | | |||
Sbjct 4152 TTTTGTG--GAAGAGTTCAAGAGAAAGCACAAAAAGGATCTGCACAAGAGTCCTCGTGCT 4209
Query 551898 CTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAA 551957
||||| | || || |||||||||||||||||||| ||| | || || |||| ||
Sbjct 4210 CTTCGGAGACTGAGGACTGCTTGCGAAAGAGCCAAGCGAACACTGTCCAGCAGTACAGAA 4269
Query 551958 ACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG-AG 552016
| ||||||| | || | | ||||| || ||||| | | | || | | | |
Sbjct 4270 GCTTCTATTGAGATTGACGCCCTCTTTGAAGGCATTGACTTCTACA-GCAAAATCAGCCG 4328
Query 552017 GGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACA 552076
|||| |||||||| | ||| || || ||| || ||| | ||||| || || |
Sbjct 4329 TGCCAGGTTTGAAGAACTGTGTATGGACCTGTTTCGAGGTACACTGGAACCTGTTGAGCG 4388
Query 552077 AGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGG 552136
|| | | ||| | ||||| || || | | | |||||| || |||||||| ||
Sbjct 4389 AGCTCTTTCTGATGCCAAGATGGACAAGAGTAGAATTAGTGAAATAGTTCTTGTTGGAGG 4448
Query 552137 ATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATT 552196
||| || | || || || || | | |||||| || |||||||||||| | |
Sbjct 4449 ATCCACTCGGATCCCCAAGATCCAGAAGTTGTTAAAGGATTTCTTCAATGGTAAAGA--T 4506
Query 552197 AAATGAAAGT--GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT 552254
||| | || | ||||| || || ||||| |||||||| || ||| |||| |||||
Sbjct 4507 CTATGTATGTCGATCAATCCTGACGAAGCTGTGGCCTATGGAGCTGCAGTTCAGGCAGCC 4566
Query 552255 ATTCTTTCTGGACAAAC---TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACT 552311
| | ||| | || | || || | | | | | ||| || |||||||| |
Sbjct 4567 GTGTTGAGTGGTGATACCAGTCAT-AATATCAAGGACGTGTTG--CTCGTAGATGTAGCA 4623
Query 552312 CCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAAT 552371
||| | ||||||||| | || || | |||||| | ||||| || || | || |||||
Sbjct 4624 CCTTTGTCTCTTGGTATCGAGACTGCTGGAGGAGTAATGACCAAAATTGTAGAACGAAAT 4683
Query 552372 ACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCT 552431
| | |||||||| || | |||| || ||| | || ||||| || || ||| |||
Sbjct 4684 TCCAGAATTCCTTGCAAGACCTCTCAGGTTTTTACAACCTATTCTGACAACCAACCTGGA 4743
Query 552432 GTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT--- 552488
|| ||||| ||| | ||||| || || ||| | | || ||||| || | ||||
Sbjct 4744 GTGACAATCCAAGTATTTGAGGGGGAGAGAGCAATGACCAAAGACAA----CCACTTGTT 4799
Query 552489 --GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAG 552546
|| | ||| || | | ||||| ||||| || |||||||| || || |||||||| |
Sbjct 4800 GGGGAAGTTTGAACTGA-TGGGTATACCTCCAGCACCTCGTGGTGTGCCTCAAATTGAGG 4858
Query 552547 TTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583
| ||||| || || ||||| || || ||| || ||||
Sbjct 4859 TGACTTTTGACATTGATGCAAACGGCATTCTGCATGT 4895
Score = 178 bits (196), Expect = 1e-38
Identities = 373/554 (67%), Gaps = 8/554 (1%)
Strand=Plus/Plus
Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050
||| || ||||| || | || || || || |||||| || || | | || || ||
Sbjct 3444 AGCGATTGGTATTGACCTCGGCACAACTTACTCTTGTGTGGGAGTGTTCGAGAACGGAAA 3503
Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110
||| || || |||||||||||||||||||||||||| || ||| ||| ||| | || ||
Sbjct 3504 AGTCGAGATCATTGCCAATGATCAAGGTAACAGAACAACACCAAGTTACGTTGCCTTTAC 3563
Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170
|| || || | || |||| ||||||||||||| || | || ||||| ||
Sbjct 3564 AGACACAGAGCGATTGATTGGAGATGCAGCAAAATCCCAGGTATCTCTGAATCCCGAGAA 3623
Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230
| | ||||| || || | | || || | | | | ||||| | | | ||
Sbjct 3624 CTCAGTATTTGACGCCAAGAGACTCATCGGCCGTCGGTATGATGATCCAAAGATCCAACA 3683
Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290
||| ||||||| ||||||||| | || ||| || || || | | |||
Sbjct 3684 AGACCTGAAGCACTGGCCTTTCACCGTCGTAAATCAGGGCGGTAAGCCAAAAGTGAAAGT 3743
Query 550291 TACTCATGAAGGATCTGTTAAACAA--TTTTCA--CCAGAACAAATTTCATCTATGGTTT 550346
| | | |||| | ||| || | |||| || ||| |||| ||||||||
Sbjct 3744 TTCATTTAAAGG----GGAAAATAAGCTATTCAATCCTGAAGAAATCAGTGCTATGGTTC 3799
Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406
||| || |||||| ||||||| || | | |||| || || | ||||||||||
Sbjct 3800 TAACAAAGATGAAAGAAACAGCTGAAGCCTATCTTGGCCAGCCGGTGAAAGATGCAGTAA 3859
Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466
| || || ||||| || |||||||| || || | |||||||| |||||||||||| ||
Sbjct 3860 TCACAGTTCCAGCTTACTTTAATGATTCTCAGAGACAAGCTACCAAAGATGCTGGAGCTA 3919
Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526
| | ||||||||||| || | ||||| |||||||| || |||||||| | ||||| |
Sbjct 3920 TCACAGGACTTAATGTACTGAGAATTATAAATGAACCAACAGCTGCTGCCTTAGCATACG 3979
Query 550527 GACTTGATAAACAT 550540
| || |||||| ||
Sbjct 3980 GTCTCGATAAAAAT 3993
>seq5467
Length=66102
Score = 147 bits (162), Expect = 2e-29
Identities = 171/226 (76%), Gaps = 6/226 (3%)
Strand=Plus/Plus
Query 563260 CGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTCTTG 563317
|| || || |||||||| || ||| ||||| |||||||| |||| || || | |
Sbjct 29833 CGCAGAACCAGATGAAGAGTTGATTCCTTTTGG--ATATTGTAGTCAGAAAGGGTCCGTC 29890
Query 563318 AATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTT 563377
||| || |||||||| || |||||||| ||||||||||| || || ||||| |||||||
Sbjct 29891 CATCCTCCAGTTGTTTACCTGCAAAAATGAGTCTTTGCTGGTCTGGTGGAATACCTTCTT 29950
Query 563378 TATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGT-GTGAGTACATTCGAGAGTA 563436
| |||||||||||| |||||| |||||| |||||| | | ||| ||| ||||||
Sbjct 29951 TGTCTTGAATTTTTGCTTTTACATTCTCAATAGTATCACTAGGTTCTAC-TTCCAGAGTA 30009
Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATAGACATCT 563482
| ||||| ||||| || ||||| || || || ||||| | ||||
Sbjct 30010 ATGGTTTTGCCAGTTAGGGTTTTCACAAAGATCTGCATGGTGATCT 30055
>seq4435
Length=89394
Score = 141 bits (156), Expect = 7e-28
Identities = 141/183 (77%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351
|||||| ||||| | || || | |||||| | ||||| || |||||||| | |||
Sbjct 36227 AATATTATAATCTGATAAGGTGCGACCATCTTCCAACTGTTTCCCTGCAAAAATCAATCT 36168
Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411
||| ||||| || |||||||||||||||||||||||||| |||||| ||||| ||
Sbjct 36167 TTGTTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGT 36108
Query 563412 ATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471
|||| || | | ||| ||||||| ||||| |||||||| |||||||| || |||||
Sbjct 36107 ATCACTGGGTTCAACTTCCAGAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAGATTTG 36048
Query 563472 CAT 563474
|||
Sbjct 36047 CAT 36045
Score = 127 bits (140), Expect = 2e-23
Identities = 138/183 (75%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351
|||||| ||||| | || || | |||||| | |||||| || |||||||| | |||
Sbjct 32837 AATATTATAATCTGATAAGGTGCGCCCATCTTCTAATTGTTTCCCTGCAAAAATCAATCT 32778
Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411
||| ||||| || ||||||||||||||||| || |||||| ||| || ||||| ||
Sbjct 32777 TTGTTGATCTGGTGGAATTCCTTCTTTATCCTGGATTTTTGCTTTCACGTTTTCAATAGT 32718
Query 563412 ATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471
|||| || | | |||||| || | ||| || || ||||||||||| ||||| || ||
Sbjct 32717 ATCACTGGGTTCAACTTCGAGGGTTATAGTCTTGCCTGTAAGAGTTTTGACGAAGATCTG 32658
Query 563472 CAT 563474
|||
Sbjct 32657 CAT 32655
Score = 120 bits (132), Expect = 2e-21
Identities = 156/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322
||||| | |||||||| |||||| ||| |||||||| | || |||||| ||||
Sbjct 36712 AGTACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCTGACAGGGTTCTTCCATCT 36653
Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382
|| | ||| || || |||||||| | ||||| || || ||||| ||||| || ||||||
Sbjct 36652 TCCAATTGCTTCCCAGCAAAAATTAACCTTTGTTGGTCTGGAGGGATTCCCTCCTTATCT 36593
Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTG-AGTACATTCGAGAGTAACAGT 563441
||||| || ||| || || ||||||||| || | ||| || || || | ||
Sbjct 36592 TGAATCTTAGCTTTCACATTTTCGATTGTATCACTGGGTTCTAC-CTCAAGGGTGATGGT 36534
Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||| || || ||||| ||||| |||||||||||
Sbjct 36533 TTTTCCTGTCAGAGTCTTAACAAAAATTTGCAT 36501
Score = 114 bits (126), Expect = 1e-19
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313
||||| | || || | ||||| ||| ||||| || || ||||| | ||||||
Sbjct 36493 CTGAGCCTCAGGACTAAGTGAAGTGTAGACTCTTTCTGGATGTTATAATCTGACAGAGTT 36434
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
|| |||||| | |||||||| ||||| || | || || || || || |||||||||
Sbjct 36433 CTCCCATCTTCTAACTGTTTTCCTGCAAAGATTAACCTCTGTTGGTCTGGTGGAATTCCT 36374
Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433
|||||||| || |||||| ||| || ||||| || ||| || | | ||||||
Sbjct 36373 TCTTTATCCTGGATTTTTGCTTTCACATTTTCAATAGTGTCACTGGGTTCAACTTCGAGG 36314
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | ||| || || ||||||||||| ||||| || |||||
Sbjct 36313 GTTATAGTCTTGCCTGTAAGAGTTTTGACGAAGATCTGCAT 36273
>seq1351
Length=294006
Score = 141 bits (156), Expect = 7e-28
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 550307 GTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACA 550366
|| ||| ||||| || || ||||||| ||||||||||||| || ||||| |||
Sbjct 248317 GTCAAATCATTTTACCCTGAGGAAATTTCTTCTATGGTTTTAACTAAGATGAAGGAAATT 248258
Query 550367 GCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTT 550425
|| || | | | || |||| | | | |||| ||||| |||||||| || || ||
Sbjct 248257 GCAGAGGCATATTTAGGG-AAGACAATCTCAAATGCTGTAATCACTGTACCTGCCTACTT 248199
Query 550426 TAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCT 550485
|||||||| || || || ||||| || ||||||||| ||| ||||| | ||||| ||
Sbjct 248198 CAATGACTCCCAGCGGCAGGCTACGAAGGATGCTGGAACCATTTCTGGAATGAATGTACT 248139
Query 550486 TCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537
|||||| || ||||||||||| ||||| || |||| ||||| || ||||||
Sbjct 248138 TCGTATAATTAATGAACCTACAGCTGCAGCTATTGCGTATGGCCTAGATAAA 248087
Score = 134 bits (148), Expect = 1e-25
Identities = 207/290 (71%), Gaps = 8/290 (3%)
Strand=Plus/Minus
Query 551964 ATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAA 552023
||||| |||| || || ||||| || |||| | || | ||||| | | ||
Sbjct 244766 ATTGAGATAGACTCTTTGTTTGAAGGGGTTGACTTCTATTCAACTATTACACGAGCTCGT 244707
Query 552024 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGT-TTT 552082
|||||||| | |||||| ||||| || || |||||||||| ||| |||| |||
Sbjct 244706 TTTGAAGAATTGAATTCTGACCTCTTCCGAGGCACTCTTGAACCAGTTGAA-AAGTCTTT 244648
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
|| ||| ||||| | |||||| |||| ||||| ||||||||||| |||||||||||
Sbjct 244647 GAGGGATGCAAAGCTAGATAAAAGTCAAGTTCATGATATTGTGCTTGTAGGTGGATCTAC 244588
Query 552143 AAGAATTCCTAAAATTCGCGAAA---TGTTAAGTTCTTATTTCAATGGTAAAAAATTAAA 552199
||||| || ||||| | ||| | || || || |||| ||||||| | | ||
Sbjct 244587 CAGAATCCCAAAAAT--CCAAAAGCTTCTTCAG-GATTTCTTCAGTGGTAAAGATCTGAA 244531
Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAG 552249
||||| | ||||| ||||| |||||||| |||||||| || ||||||
Sbjct 244530 CAAAAGTATCAATCCTGATGAAGCTGTTGCATATGGTGCAGCTGTTCAAG 244481
Score = 129 bits (142), Expect = 5e-24
Identities = 291/432 (67%), Gaps = 7/432 (2%)
Strand=Plus/Minus
Query 552290 TATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTAT 552349
||||| ||| |||||||||| || || || | ||| | ||||||| ||||| | ||
Sbjct 243803 TATTG--CTTCTAGATGTTACACCCCTTTCCTTGGGTATTGAAACAGCAGGAGGAGTAAT 243746
Query 552350 GACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTAC 552409
||| | ||||||| | | || ||||| || || | || | | |||| | ||
Sbjct 243745 GACCACTCTTATCAAACGCAACACTACCATCCCAACCCGACAAACCCAGACATTTACAAC 243686
Query 552410 GTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCAC 552469
||||| ||||| ||| | | ||| || ||| | | ||||| ||| | | ||
Sbjct 243685 ATATTCGGATAACCAACCAGGTGTGCTTATCCAAGTGTACGAAGGTGAACGTGCCATGAC 243626
Query 552470 TAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGG 552529
||| || ||||| | | || | ||| | ||| ||||| ||||| || ||||| ||
Sbjct 243625 TAAGGACAATAACCTGTTGGGCAAGTTTGAGTTAACTGGTATACCTCCAGCACCTCGAGG 243566
Query 552530 AGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589
||| || || || |||||||| || ||||| ||||||||||| ||| ||||||| |||||
Sbjct 243565 AGTTCCTCAGATCGAAGTTACCTTTGATATAGATGCCAATGGCATTATGAATGTCACTGC 243506
Query 552590 TTGTGATAA-ATC-TAGCAACAAGAGTAAAAATATTACTNNNNNNNATAATCGTGGTAGA 552647
| ||||| | | || || ||||| || || || ||| || | ||| |
Sbjct 243505 TGTGGATAAGAGCACAGGAA-AAGAG-AATAAGATCACTATTACTAATGACAAGGGTCGT 243448
Query 552648 TTTACTGATGAACAAATTAAACGTATGGTCGAAGAAGCTAAAGAATTTGAAGAAGCTGAT 552707
| || | ||| |||| || | ||||| |||||||| || | | | ||||| ||||
Sbjct 243447 CTGTCTAAAGAAGAAATAGAAAGAATGGTAAAAGAAGCTGAAAATTATAGAGAAGATGAT 243388
Query 552708 -AATAAGAGAAA 552718
|| || |||||
Sbjct 243387 GAAAAACAGAAA 243376
Score = 113 bits (124), Expect = 4e-19
Identities = 144/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050
|||||| ||||| ||||| |||||||||||| |||||| || || | || |||| ||
Sbjct 249038 AGCTATCGGTATTGATTTGGGAACCACATATTCTTGTGTGGGAGTGTTCCAGCATGGAAA 248979
Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110
||| ||||| || || ||||||||||| ||| | |||||||| |||||| | || ||
Sbjct 248978 AGTAGAAATAATAGCTAATGATCAAGGAAACCGCACTACTCCCAGTTATGTAGCATTTAC 248919
Query 550111 GGAAACTG-AACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTAC 550167
|| || | || | ||| |||| |||||||| ||| | || | || || || ||||
Sbjct 248918 AGATACAGAAAGACTTA-TTGGGGATGCAGCTAAAAACCAGGTTGCAATG--AACCCTAA 248862
Query 550168 CAATACTATTTTTG 550181
|||||| | ||||
Sbjct 248861 TAATACTGTATTTG 248848
>seq138
Length=1029753
Score = 141 bits (156), Expect = 7e-28
Identities = 252/365 (69%), Gaps = 2/365 (1%)
Strand=Plus/Plus
Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAG 550232
|||| | ||||||||||| | ||||| ||| | ||||| | |||||| |||
Sbjct 911107 CTATGATAGATGCTAAACGACTTATTGGTCGAAAATGGGATGATCCAACTGTTGCTTCAG 911166
Query 550233 ATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTA 550292
| ||||| || ||||| ||| | | || | | |||| ||||| | || | | |
Sbjct 911167 ACATGAAACACTGGCCCTTCGATGTCACCAACGATGCTGGTAAACCAAAAATCCAGGTTG 911226
Query 550293 CTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGA 550352
|| | || ||| ||||| || ||| |||| || || |||||| | | |
Sbjct 911227 AGTATAAGGGGGAGAACAAAACATTTTATCCTGAAGAAATCTCTTCAATGGTTCTTACCA 911286
Query 550353 AAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACT 550411
| |||||| || || |||| |||| |||| || || |||| ||| | ||
Sbjct 911287 AGATGAAAGAAGTGGCTGAAGCTTACCTTGGG-AAGACTGTCACAAATGCCGTAGTCACC 911345
Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471
|| ||||| |||||||||||||| || ||||| || || ||||||||||| ||||||
Sbjct 911346 GTTCCAGCCTATTTTAATGACTCCCAGCGTCAGGCAACCAAAGATGCTGGCACAATTGCT 911405
Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531
|| | |||||| | ||||| || |||||||| || ||||| ||| ||||||||||||||
Sbjct 911406 GGTATGAATGTTTTACGTATCATTAATGAACCAACAGCTGCAGCAATTGCATATGGACTT 911465
Query 550532 GATAA 550536
|| ||
Sbjct 911466 GACAA 911470
Score = 120 bits (132), Expect = 2e-21
Identities = 122/159 (77%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050
||| || ||||| || | || || || || |||||| || || | ||| |||||||
Sbjct 910348 AGCAATCGGTATTGACCTTGGTACAACCTACTCTTGTGTGGGAGTGTTTCAACATGGTAA 910407
Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110
||||||||| ||||||||||||||||| |||||||| || || ||||| | |||||
Sbjct 910408 AGTTGAAATAATTGCCAATGATCAAGGAAACAGAACAACCCCCAGCTATGTAGCATTCAC 910467
Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA 550149
|| || |||| ||| ||||||||||||| ||| ||||
Sbjct 910468 AGATACAGAACGTTTGATTGGTGATGCAGCCAAAAATCA 910506
>seq1156
Length=327524
Score = 140 bits (154), Expect = 3e-27
Identities = 164/219 (75%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
||||| || ||||||||||| || ||||| |||||||||||| | ||| ||||||
Sbjct 17709 AGACGTAGAACAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCTGATAGTGTTCTT 17650
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
|||||| || || ||||| ||||| || | ||| || |||||||| ||||||||||||
Sbjct 17649 CCATCTTCTAGCTGCTTTCCTGCAAATATTAATCTCTGTTGATCAGGGGGAATTCCTTCT 17590
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGT-GTGAGTACATTCGAGAGT 563435
|||||||| |||||| ||||| |||||| || ||| | | ||| ||| | ||
Sbjct 17589 TTATCTTGGATTTTTGCCTTTACATTCTCAATAGTGTCACTAGGCTCTAC-TTCTAAGGT 17531
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| ||| || || || | ||||| || || || |||||
Sbjct 17530 AATAGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 17492
>seq1267
Length=316221
Score = 125 bits (138), Expect = 6e-23
Identities = 166/225 (74%), Gaps = 8/225 (4%)
Strand=Plus/Plus
Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311
||||| | || || | ||||| || ||| | |||| |||||||||||||| || ||
Sbjct 205981 CTGAGCCTCAGCACTAAGTGAAGTGTTGACTCTTTTTG--AATATTGTAATCAGATAAAG 206038
Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371
||||| |||||| | || ||||| |||||||| | |||||||| || ||||| || |
Sbjct 206039 TTCTTCCATCTTCCAACTGCTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGAGGGATCC 206098
Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTC 563429
| |||||||| || ||||| ||||| ||||| || ||| | || || || |||
Sbjct 206099 CCTCTTTATCCTGGATTTTAGCCTTTACGTTTTCAATAGTGTCACT-TG-GTTCAACTTC 206156
Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| || | ||||||||| || ||||| ||||| || || |||||
Sbjct 206157 CAGGGTGATAGTTTTACCTGTCAGAGTCTTAACAAAGATCTGCAT 206201
Score = 122 bits (134), Expect = 7e-22
Identities = 162/223 (73%), Gaps = 4/223 (2%)
Strand=Plus/Plus
Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311
||||| | || || | ||||| || ||| | |||| |||||||||||||| || ||
Sbjct 206209 CTGAGCCTCAGCACTAAGTGAAGTGTTGACTCTTTTTG--AATATTGTAATCAGATAAAG 206266
Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371
||||| |||||| | || ||||| |||||||| | || ||||| || ||||| ||||
Sbjct 206267 TTCTTCCATCTTCCAACTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGAGGGATTC 206326
Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGA 563431
||||||| ||||| || || || || |||||||| ||| || | | ||| |
Sbjct 206327 CTTCTTTGTCTTGGATCTTAGCCTTCACATTTTCAATTGTGTCACTGGGTTCAACTTCTA 206386
Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| |||| ||||| || ||||| ||||| || || || |||||
Sbjct 206387 GGGTAATGGTTTTGCCGGTAAGGGTTTTCACAAAGATCTGCAT 206429
Score = 93.3 bits (102), Expect = 3e-13
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325
|| |||||||| ||| |||||| ||| || || || | | || | ||| ||
Sbjct 206449 ACTAGATGAAGAGTAGATTCTTTTTGAATGTTATAGTCTGACAATGTGCGACCATCCTCC 206508
Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385
| |||||||| |||||||| | ||| || || || || |||||||||||||| ||||||
Sbjct 206509 AACTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGAATTCCTTCTTTGTCTTGA 206568
Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTT 563444
||||| || || ||||| || ||| | | | || ||| ||||| | ||||||
Sbjct 206569 ATTTTGGCCTTGACATTTTCAATGGTGTCACT-AGGCTCCACTTCCAGAGTGATAGTTTT 206627
Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| || || ||||| || || || |||||
Sbjct 206628 TCCTGTTAGCGTTTTTACAAAGATCTGCAT 206657
>seq629
Length=499154
Score = 114 bits (126), Expect = 1e-19
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325
|| ||||| |||||| |||||| || ||||| |||| || |||| ||| ||
Sbjct 5946 ACCAGATGTAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTTCGACCATCCTCC 5887
Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385
|||||||| || ||||| || ||||| || || ||||| || || ||||| || |||||
Sbjct 5886 AGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGG 5827
Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTT 563444
|| ||| |||||| ||| ||||| ||| | || | || ||| | ||| | |||||
Sbjct 5826 ATCTTTGCTTTTACATTCTCTATTGTGTCACT-TGGCTCCACTTCCAAAGTGATGGTTTT 5768
Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||||| || || || || |||||||||||
Sbjct 5767 TCCAGTGAGGGTCTTCACAAAAATTTGCAT 5738
Score = 105 bits (116), Expect = 5e-17
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325
|||||||| | ||| || || ||| |||||||| | || || | | ||| ||
Sbjct 6174 ACAAGATGCAAAGTAGACTCCTTTTGAATGTTGTAATCTGAGAGTGTACGTCCATCCTCT 6115
Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385
|||||||| || ||||| || ||||| || || ||||| || || ||||| || |||||
Sbjct 6114 AGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGG 6055
Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTT 563444
|| ||| |||||| ||| ||||| ||| | || | || ||| | ||| | |||||
Sbjct 6054 ATCTTTGCTTTTACATTCTCTATTGTGTCACT-TGGCTCCACTTCCAAAGTGATGGTTTT 5996
Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||||| || || || || |||||||||||
Sbjct 5995 TCCAGTGAGGGTCTTCACAAAAATTTGCAT 5966
>seq665
Length=482145
Score = 93.3 bits (102), Expect = 3e-13
Identities = 132/183 (72%), Gaps = 12/183 (7%)
Strand=Plus/Plus
Query 550026 GTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAA 550085
|||||||||||| | ||||||| |||||||| ||||| || ||||| ||||||||||
Sbjct 78468 GTGTTGGTGTTTTTAAGAATGGTAGGGTTGAAATCATTGCTAACGATCAGGGTAACAGAA 78527
Query 550086 CTACTCCATCTTATGTTTCTTTCACG---GAAACTGAACATTTAGTTGGTGATGCAGCAA 550142
||| || ||||| ||| | |||||| || ||||| | | || ||||||||||
Sbjct 78528 TTACGCCGTCTTACGTTGCCTTCACGCCCGATGGTGAACGGCTCATCGGAGATGCAGCAA 78587
Query 550143 AATATCAAGCCACTGGTAATCCTACC-----AATACTATTTTTGATGCTAAACGTTTAAT 550197
|| || | |||| || || ||| || || | |||||||| |||||||| ||
Sbjct 78588 AA---AAATCAACTGACAA-CCAACCCCGAGAACACGGTATTTGATGCCAAACGTTTGAT 78643
Query 550198 TGG 550200
||
Sbjct 78644 AGG 78646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4014129092723570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |