Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_017825.1
Length=36711
Score E
Sequences producing significant alignments: (Bits) Value
seq70663 201 3e-47
seq73759 125 2e-24
>seq70663
Length=227
Score = 201 bits (222), Expect = 3e-47
Identities = 184/224 (82%), Gaps = 9/224 (4%)
Strand=Plus/Plus
Query 6059 GCCAGCGGAG-ATGCCTTTCAAGAGCCCCTCGTCCATC-TGGTCAGAAAAGACGAttttt 6116
||| |||| | |||||||| | | | || | |||||| |||||||||||||| || |||
Sbjct 7 GCCCGCGGTGGATGCCTTTGAGG-GTGCCGCATCCATCGTGGTCAGAAAAGACAATCTTT 65
Query 6117 ttGTTGTCGAGCTTGGTGGCGAAGGAGCCGTAGAGGGCGTTGGAAAGGAGCTTGGCGATG 6176
| |||| ||||||||||| || | ||||||||||||||||| || | ||||||||||
Sbjct 66 TG--TGTCAAGCTTGGTGGCAAACGC-CCGTAGAGGGCGTTGGACAGCAACTTGGCGATG 122
Query 6177 GAGCGCATGGTCTGGtttttttCCTTGTCGGCGCGCTCCTTGGCCGCGATGTTGAGCTGC 6236
||||||| ||| |||||||| | |||||||||||||||||||||||||| ||||||
Sbjct 123 GAGCGCAGGGTTTGGTTTTTGCGCGA-TCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGC 181
Query 6237 ACGTACTCGCGCGCCACGCACTTCCATTCGGGGAAGACGGTGGT 6280
||||| |||||||| |||||| ||||||||| | ||||||||
Sbjct 182 ACGTATTCGCGCGCAACGCACCGCCATTCGGG--AAACGGTGGT 223
>seq73759
Length=212
Score = 125 bits (138), Expect = 2e-24
Identities = 106/129 (82%), Gaps = 1/129 (1%)
Strand=Plus/Plus
Query 6528 TGCCATTCGCGCACGGCCAGCGCGCGCTCGTAGGGACTGAGGGGCGTGCCCCAGGGCATG 6587
|||||| |||| |||| |||||||||||||| || |||| || | ||||| ||||||
Sbjct 61 TGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATG 120
Query 6588 GGGTGGGTGAGCGCGGAGGCGTACATGCCGCAGATGTCGTAGACGTAGAGGGGCTC-CTC 6646
|||||||||||||||||||||||||||||||| ||||| | |||| ||||||| ||
Sbjct 121 GGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGTGAGGGGGCTCTCTG 180
Query 6647 GAGGATGCC 6655
||| || ||
Sbjct 181 GAGTATTCC 189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 116953932731818
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |