Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_020485.1 Length=34302 Score E Sequences producing significant alignments: (Bits) Value seq70663 129 1e-25 seq73759 86.0 1e-12 >seq70663 Length=227 Score = 129 bits (142), Expect = 1e-25 Identities = 144/188 (77%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 6015 TGGTCAGAAAACACAATTTGTCGGTTGTCAAGCTTAGTAGCAAATGACCCATAGAGGGCG 6074 ||||||||||| ||||| | | | |||||||||| || ||||| | ||| ||||||||| Sbjct 45 TGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACG-CCCGTAGAGGGCG 101 Query 6075 TTAGAAAGTAGTTTAGCAATGGAGCGCTGTGTTTGGTTCTTTTCCCGATCGGCTTTTTCC 6134 || || || | || || ||||||||| | |||||||| ||| | |||||||| ||| Sbjct 102 TTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTT-TTTGCGCGATCGGCGCGCTCC 160 Query 6135 TTGGCCGCAATGTTTAATTGCACATATTCACGGGCTAAACAGTTCCAGCCTGGAAACACG 6194 |||||||| ||||||| ||||| ||||| || || | || ||| | |||| ||| Sbjct 161 TTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGAA--ACG 218 Query 6195 GTGGTGCG 6202 |||||||| Sbjct 219 GTGGTGCG 226 >seq73759 Length=212 Score = 86.0 bits (94), Expect = 1e-12 Identities = 94/124 (76%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 6454 CGCGTACGGCCAAAGCTCGTTCATATGGACTTAAGGGGGCACCCCATGGCATAGGATGGG 6513 |||| |||| | || || || ||||| | | |||| |||||||||||| || |||| Sbjct 68 CGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGTGGG 127 Query 6514 TTAAAGCTGAAGCGTACATGCCGCAAATGTCATAAACATAAATGGGCTC-CTGAAGTACT 6572 | | || || |||||||||||||||||||| |||| | | |||||| ||| |||| | Sbjct 128 TGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGTGAGGGGGCTCTCTGGAGTATT 187 Query 6573 CCAA 6576 |||| Sbjct 188 CCAA 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109271386336624