Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2361 113 5e-20 >seq2361 Length=188731 Score = 113 bits (124), Expect = 5e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || |||||||| || || || || || || || |||||||| |||||||||||||| || Sbjct 140505 ACTCCAATAGGGCCAACACCTGGTCCACCTCCACCATGTGGGATACAGAATGTCTTGTGC 140446 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||| || ||| | |||||||| |||||||| | || | | || ||||| ||| Sbjct 140445 AAATTCAGGTGAGACACATCTGCTCCATAGTCTCCAGGCCTACACAATCCAACCTGGGCA 140386 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || || ||||| | || || || ||||||| |||||||| | || || ||| Sbjct 140385 TTCATGTTAGCCCCATCCAAGTACACTTGTCCACCATACTCATGAACAAGATTGCACATC 140326 Query 138363 TGTCT 138367 | ||| Sbjct 140325 TCTCT 140321 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || ||||||||||| ||| |||||||||||| ||| || ||||| || | || Sbjct 69311 CATAGCTTCTGCTGCTGCCGTTCCTTCATCTAATAAAGAAGCATTTGCAATGTCCAGACC 69252 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCT-TCCAATCTTCCCTGAGATA 139977 || | || | || | ||||| ||||| || ||||| || | |||||| |||| || Sbjct 69251 AGTCAAGTCAGCTATCATTGTTTGATAATTCAA-CAAGCTCTCTAGTCTTCCTTGAGCTA 69193 Query 139978 TCTCAGCTTGATAGGGAGTGTA 139999 | |||||||| || |||||||| Sbjct 69192 TTTCAGCTTGGTATGGAGTGTA 69171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576922741398360