Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_022266.1 Length=31967 Score E Sequences producing significant alignments: (Bits) Value seq70663 230 5e-56 seq73759 104 5e-18 >seq70663 Length=227 Score = 230 bits (254), Expect = 5e-56 Identities = 186/218 (85%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 6213 GATGCTTTTGACGGTGGCGGGGTCCATC-TGGTCAGAAAAGACGATCTTTTTGTTGTCCA 6271 ||||| ||||| |||| || |||||| |||||||||||||| ||||||| |||| | Sbjct 17 GATGCCTTTGAGGGTGCCGCA-TCCATCGTGGTCAGAAAAGACAATCTTTTG--TGTCAA 73 Query 6272 GCTTGGTGGCGAACGACCCGTAGAGGGCGTTGGAGAGCAGCTTGGCGATGGAGCGCAGGG 6331 |||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||||| Sbjct 74 GCTTGGTGGCAAACG-CCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGG 132 Query 6332 TCTGGTTCTTCTCGCGGTCGGCGCGCTCCTTGGCGGCGATGTTGAGCTGGACGTACTCGC 6391 | ||||| || |||| ||||||||||||||||| |||||||| ||||| ||||| |||| Sbjct 133 TTTGGTTTTTG-CGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGC 191 Query 6392 GGGCCACGCAGCGCCATTCGGGGAAGACGGTGGCGCGC 6429 | || ||||| ||||||||||| | ||||||| |||| Sbjct 192 GCGCAACGCACCGCCATTCGGG--AAACGGTGGTGCGC 227 >seq73759 Length=212 Score = 104 bits (114), Expect = 5e-18 Identities = 105/133 (79%), Gaps = 3/133 (2%) Strand=Plus/Plus Query 6688 GCCAGGGCGCGCTCGTAGGGGTTGAGGGGCGCCCCCCAGGGCATGGGATGGGTGAGGGCC 6747 || || ||||||||||| |||||||| || | ||||| |||||||| |||||||| || Sbjct 76 GCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGCATGGGGTGGGTGAGCGCG 135 Query 6748 GAGGCGTACATGCCGCAGATGTCGTAGACGTAGAGGGGCTCGC-GGAGCACGCCGAGG-T 6805 ||||||||||||||||| ||||| | |||| ||||||| | |||| | || ||| | Sbjct 136 GAGGCGTACATGCCGCAAATGTCCGAAACGTGAGGGGGCTCTCTGGAGTATTCCAAGGAT 195 Query 6806 AGGTGGGATAGCA 6818 | | ||| ||||| Sbjct 196 ATGAGGG-TAGCA 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101824833479514