Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq629 118 7e-22 seq5467 113 3e-20 seq4435 104 2e-17 seq1267 96.9 2e-15 >seq629 Length=499154 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| |||| | ||||| || | ||| || || || ||||| ||||| || Sbjct 5964 CCTCCCCTCAGCCTCGGAACCAGATGTAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAA 5905 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| |||||||| || || || |||||||||| || ||||| | || Sbjct 5904 AGTGTTCGACCATCCTCCAGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGG 5845 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || ||| ||| || |||| | ||| | | ||| || Sbjct 5844 ATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATTCTCTATTGTGTCACTTGGCTCCACT 5785 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | || ||||| ||||| ||||||||||| ||||| || |||||| Sbjct 5784 TCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCATG 5737 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| || || || || | || |||| || ||||| || || || || Sbjct 6157 CTCCTTTTGAATGTTGTAATCTGAGAGTGTACGTCCATCCTCTAGTTGTTTACCAGCAAA 6098 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||||| || ||||| | || | || |||||||| | || ||| ||| || Sbjct 6097 GATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTTGCTTTTACATT 6038 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 |||| | ||| | | ||| || || | || ||||| ||||| ||||||||||| || Sbjct 6037 CTCTATTGTGTCACTTGGCTCCACTTCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTCAC 5978 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 5977 AAAAATTTGCAT 5966 >seq5467 Length=66102 Score = 113 bits (124), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| | ||| ||||| |||| || ||||| || || || ||||| || Sbjct 29821 CCTCCTCTCAATCGCAGAACCAGATGAAGAGTTGATTCCTTTTGGATATTGTAGTCAGAA 29880 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | || |||| |||||||| || || || || || |||| |||||||||| | || Sbjct 29881 AGGGTCCGTCCATCCTCCAGTTGTTTACCTGCAAAAATGAGTCTTTGCTGGTCTGGTGGA 29940 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || || ||||| | |||||| ||| || || || || | ||| | | || | Sbjct 29941 ATACCTTCTTTGTCTTGAATTTTTGCTTTTAC--ATTCTCAATAGTATCACTAGGTTCTA 29998 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | || ||||| || || || ||||| || ||||||||||||||| Sbjct 29999 CTTCCAGAGTAATGGTTTTGCCAGTTAGGGTTTTCACAAAGATCTGCATG 30048 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || | || || ||||| || || | || || |||||||| ||||| || | Sbjct 29591 TTCCACCACGCAGTCTTAGGACAAGATGCAAAGTAGATTCTTTCTGAATATTATAATCAG 29650 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| | || |||| ||||| || || || || || ||||||| || ||||| | | Sbjct 29651 AAAGGGTCCGTCCATCCTCCAGCTGTTTACCTGCAAAAATCAGTCTCTGTTGGTCAGGTG 29710 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | || || ||||| | || ||| ||| || || || || | ||| | | || Sbjct 29711 GAATGCCTTCTTTGTCTTGGATCTTTGCTTTTAC--ATTCTCAATTGTGTCACTTGGTTC 29768 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || || || ||||| ||||||||||| ||||| |||||||| Sbjct 29769 CACCTCCAAAGTGATAGTTTTTCCAGTGAGGGTCTTGACAAAAATCTGCAT 29819 >seq4435 Length=89394 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| | || ||||| |||| ||||| ||| || ||||||||||| || || || Sbjct 36727 CCTCCACGCAGTCTCAGTACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCTGAC 36668 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | | |||| |||| |||||| || || || || | | ||| |||||| | || Sbjct 36667 AGGGTTCTTCCATCTTCCAATTGCTTCCCAGCAAAAATTAACCTTTGTTGGTCTGGAGGG 36608 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | |||||||| || | || || ||| || | | || | ||| ||| || || Sbjct 36607 ATTCCCTCCTTATCTTGAATCTTAGCTTTCACATTTTCGATTGTATCACTGGGTTCTACC 36548 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||| ||||| ||||| || || ||||| ||||| || ||||| Sbjct 36547 TCAAGGGTGATGGTTTTTCCTGTCAGAGTCTTAACAAAAATTTGCAT 36501 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||||||||| ||||| || |||| | ||||| |||| || | ||| || || || || | Sbjct 32844 CCTTCTGAATATTATAATCTGATAAGGTGCGCCCATCTTCTAATTGTTTCCCTGCAAAAA 32785 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| || ||| || ||| | || | || || || || | |||||| ||| ||| | Sbjct 32784 TCAATCTTTGTTGATCTGGTGGAATTCCTTCTTTATCCTGGATTTTTGCTTTCACGTTTT 32725 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | ||| ||| || || || | |||||| ||||| || || || || || || | Sbjct 32724 CAATAGTATCACTGGGTTCAACTTCGAGGGTTATAGTCTTGCCTGTAAGAGTTTTGACGA 32665 Query 34968 AGATCTGCATG 34978 ||||||||||| Sbjct 32664 AGATCTGCATG 32654 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 ||||| ||||| || | || |||||||||||| || || || || | | | || || Sbjct 36031 CTCAGAACCAGATGTAAAGTAGACTCCTTCTGAATATTGTAATCTGACAAGGTACGTCCA 35972 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||| |||||||| || ||||| | || ||| || || | || | |||||||| Sbjct 35971 TCTTCCAACTGCTTTCCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATTCCCTCCTTA 35912 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | ||||| ||||||| |||| | || | | ||| || || | || || Sbjct 35911 TCTTGGATTTTAGCTTTGACGTTCTCTATGGTGTCGCTAGGCTCTACCTCCAAAGTGATT 35852 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || || ||||||||||| |||||||| Sbjct 35851 GTCTTGCCTGTTAGCGTCTTTACAAATATCTGCAT 35817 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| || | ||||||||| | ||||| || ||| ||||| |||||||| || | Sbjct 36501 TTCCTCCTCTGAGCCTCAGGACTAAGTGAAGTGTAGACTCTTTCTGGATGTTATAATCTG 36442 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | | |||| || | || ||||| || ||||| | | || |||||| | | Sbjct 36441 ACAGAGTTCTCCCATCTTCTAACTGTTTTCCTGCAAAGATTAACCTCTGTTGGTCTGGTG 36382 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || || || | |||||| ||| || | | || | ||| ||| || | Sbjct 36381 GAATTCCTTCTTTATCCTGGATTTTTGCTTTCACATTTTCAATAGTGTCACTGGGTTCAA 36322 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | |||||| ||||| || || || || || || |||||||||||| Sbjct 36321 CTTCGAGGGTTATAGTCTTGCCTGTAAGAGTTTTGACGAAGATCTGCATG 36272 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | |||||| || |||| ||||| ||| |||||||||||| ||||| || ||| Sbjct 36271 CCACCACGCAACCTAAGTACCAAGTGAAGTGTGGACTCCTTCTGAATATTATAATCTGAT 36212 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | |||| |||| |||| || || || || || |||| || ||| || ||| | || Sbjct 36211 AAGGTGCGACCATCTTCCAACTGTTTCCCTGCAAAAATCAATCTTTGTTGATCTGGTGGA 36152 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || || || | ||||| ||| || | | || | ||| ||| || || Sbjct 36151 ATTCCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATAGTATCACTGGGTTCAACT 36092 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || || ||||| || || || || |||||||| ||||| Sbjct 36091 TCCAGAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAGATTTGCAT 36045 >seq1267 Length=316221 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| || | |||||| || | ||||| || ||| || ||||| || || || ||| Sbjct 205975 CCTCCTCTGAGCCTCAGCACTAAGTGAAGTGTTGACTCTTTTTGAATATTGTAATCAGAT 206034 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | | |||| |||| |||||||| || || |||| | |||||||||| | || Sbjct 206035 AAAGTTCTTCCATCTTCCAACTGCTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGAGGG 206094 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | |||||| || || | ||||| || ||| | | || | ||| | | || || Sbjct 206095 ATCCCCTCTTTATCCTGGATTTTAGCCTTTACGTTTTCAATAGTGTCACTTGGTTCAACT 206154 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| || || || || || || ||||| ||||||||||||||| Sbjct 206155 TCCAGGGTGATAGTTTTACCTGTCAGAGTCTTAACAAAGATCTGCATG 206202 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||| |||| || | ||| | ||| ||||||||| |||||||| || || Sbjct 205747 CCACCACGCAATCTCAATACTAAGTGGAGGGTCGACTCCTTCTGTATGTTATAATCTGAC 205806 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | | | |||| ||||||||||| || || || || | | ||||||||| | || Sbjct 205807 AAGGTTCTTCCATCCTCCAGTTGCTTGCCAGCAAAAATTAACCTCTGCTGGTCTGGAGGG 205866 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | |||||| || || | ||||| || || | | || | ||| | | || || Sbjct 205867 ATCCCCTCTTTATCCTGAATTTTAGCCTTCACATTTTCAATAGTGTCACTTGGTTCAACT 205926 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| ||||| || || || || ||||| |||||||| |||||| Sbjct 205927 TCCAGGGTGATGGTTTTACCTGTCAGAGTCTTAACAAAGATTTGCATG 205974 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| || | |||||| || | ||||| || ||| || ||||| || || || ||| Sbjct 206203 CCTCCTCTGAGCCTCAGCACTAAGTGAAGTGTTGACTCTTTTTGAATATTGTAATCAGAT 206262 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | | |||| |||| |||||||| || || |||| | ||||||||| | || Sbjct 206263 AAAGTTCTTCCATCTTCCAACTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGAGGG 206322 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || ||||| | || || || || | | || | ||| ||| || || Sbjct 206323 ATTCCTTCTTTGTCTTGGATCTTAGCCTTCACATTTTCAATTGTGTCACTGGGTTCAACT 206382 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| ||||| || || || ||||| || ||||||||||||||| Sbjct 206383 TCTAGGGTAATGGTTTTGCCGGTAAGGGTTTTCACAAAGATCTGCATG 206430 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || |||||||||||||| || | |||| |||| |||| || ||||| || || Sbjct 206467 TCTTTTTGAATGTTATAGTCTGACAATGTGCGACCATCCTCCAACTGTTTTCCAGCAAAA 206526 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || | || || |||||| | || | || || ||||| | ||||| ||||| | Sbjct 206527 ATTAATCTCTGTTGGTCTGGGGGAATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTT 206586 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | | ||| || || | || || || ||||| || || || |||||| Sbjct 206587 TCAATGGTGTCACTAGGCTCCACTTCCAGAGTGATAGTTTTTCCTGTTAGCGTTTTTACA 206646 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 206647 AAGATCTGCAT 206657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324554409314867