Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1267 105 6e-18
seq629 96.9 3e-15
seq5467 89.7 5e-13
seq4435 82.4 7e-11
>seq1267
Length=316221
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| |||||||| || ||||||||||| | || || || | |||||| ||
Sbjct 206233 GTTGACTCTTTTTGAATATTGTAATCAGATAAAGTTCTTCCATCTTCCAACTGCTTTCCT 206292
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| |||| | || ||||||||| |||||||| ||||| ||||| |||||| |||
Sbjct 206293 GCAAAAATCAACCTCTGCTGGTCTGGAGGGATTCCTTCTTTGTCTTGGATCTTAGCCTTC 206352
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | |||| ||||| |||| || || || | ||| | |||||||||||| || |||
Sbjct 206353 ACATTTTCAATTGTGTCACTGGGTTCAACTTCTAGGGTAATGGTTTTGCCGGTAAGGGTT 206412
Query 133644 TTTACGAAAATCTGCATG 133661
|| || || |||||||||
Sbjct 206413 TTCACAAAGATCTGCATG 206430
>seq629
Length=499154
Score = 96.9 bits (106), Expect = 3e-15
Identities = 147/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||||| ||| || ||||| || || ||||| || | || ||| | ||||| || |
Sbjct 5941 ATGTAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTTCGACCA-TCCTCCAGTT 5883
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| || || || | || || | ||| ||||| || ||||||||||||||||| |||||
Sbjct 5882 GTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCT 5823
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
|| || | | ||| | ||||| | |||||||| || | |||| |||||| || |
Sbjct 5822 TTGCTTTTACATTCTCTATTGTGTCACTTGGCTCCACTTCCAAAGTGATGGTTTTTCCAG 5763
Query 133636 TCAGAGTTTTTACGAAAATCTGCATGG 133662
| || || || || ||||| |||||||
Sbjct 5762 TGAGGGTCTTCACAAAAATTTGCATGG 5736
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521
|| ||||| || || || |||||||| | ||| ||| ||||| || || || |
Sbjct 6162 GTAGACTCCTTTTGAATGTTGTAATCTGAGA--GTGTACGTCCATCCTCTAGTTGTTTAC 6105
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || || | ||| ||||| || ||||||||||||||||| ||||||| |
Sbjct 6104 CAGCAAAGATCAGTCTCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTGGATCTTTGCTT 6045
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| | |||||||| || | |||| |||||| || || || |
Sbjct 6044 TTACATTCTCTATTGTGTCACTTGGCTCCACTTCCAAAGTGATGGTTTTTCCAGTGAGGG 5985
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || ||||| |||||
Sbjct 5984 TCTTCACAAAAATTTGCAT 5966
>seq5467
Length=66102
Score = 89.7 bits (98), Expect = 5e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || |||||||| ||||| ||||| | || | | | ||||| ||||| || ||
Sbjct 29623 GTAGATTCTTTCTGAATATTATAATCAGAAAGGGTCCGTCCA-TCCTCCAGCTGTTTACC 29681
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| |||| || | ||| ||||| || || |||||||| ||||| ||||||| ||
Sbjct 29682 TGCAAAAATCAGTCTCTGTTGGTCAGGTGGAATGCCTTCTTTGTCTTGGATCTTTGCTTT 29741
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | ||||| ||||| | || ||||| || | |||| ||||| || || || ||
Sbjct 29742 TACATTCTCAATTGTGTCACTTGGTTCCACCTCCAAAGTGATAGTTTTTCCAGTGAGGGT 29801
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || |||||||||||
Sbjct 29802 CTTGACAAAAATCTGCAT 29819
>seq4435
Length=89394
Score = 82.4 bits (90), Expect = 7e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||||||||| || || ||||| || || | || || | ||| || ||
Sbjct 36469 GTAGACTCTTTCTGGATGTTATAATCTGACAGAGTTCTCCCATCTTCTAACTGTTTTCCT 36410
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TT 133582
|| | || | || ||| ||||| || || || ||||| || || ||| |||||| ||
Sbjct 36409 GCAAAGATTAACCTCTGTTGGTCTGGTGGAATTCCTTCTTTATCCTGGAT-TTTTGCTTT 36351
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | |||| ||||| |||| || || |||| ||| | || ||||| || |||||
Sbjct 36350 CACATTTTCAATAGTGTCACTGGGTTCAACTTCGAGGGTTATAGTCTTGCCTGTAAGAGT 36291
Query 133643 TTTTACGAAAATCTGCATG 133661
||| ||||| |||||||||
Sbjct 36290 TTTGACGAAGATCTGCATG 36272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481687778731320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |