Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq95 102 2e-16 seq3845 87.8 4e-12 >seq95 Length=1219430 Score = 102 bits (112), Expect = 2e-16 Identities = 146/203 (72%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 304938 AGGCATCTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAG 304997 ||||| |||| ||| || |||||| ||||| | | | |||| | | ||| | |||| Sbjct 612085 AGGCAATGCAAAAATCAGGAAGACCTCTAAAGTCTTTGAAGCAAAGATTAAAAAGCAAAG 612144 Query 304998 AGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAA 305057 | || | |||||||||||||| |||||||| || || ||||| || ||| ||| | Sbjct 612145 AAGGGAGGATTCGAGGTAATCTCATGGGAAAGCGAGTAGATTTCTCGGCTCGAACTGTTA 612204 Query 305058 TCACACCTGATTCTCAAATT-AGTCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTA 305116 |||||||||| || ||| || || | ||||| ||||||| ||| | ||||| | Sbjct 612205 TCACACCTGA-TCCCAATTTAAGAATAGATGAAGTAGGAGTACCACGTTCTATTGCACAA 612263 Query 305117 AAACTAACATTTCCAGAGAAAGT 305139 || | ||||||||||| | ||| Sbjct 612264 AACTTGACATTTCCAGAAATAGT 612286 >seq3845 Length=110360 Score = 87.8 bits (96), Expect = 4e-12 Identities = 118/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 131465 ATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGAT 131524 |||||||||||| | | || | ||||||||||| ||||| | ||| || ||||||| Sbjct 70880 ATGTATAAGAAAGCAGAGGCTTCATTCTGGACTGTAGAAGAAGTTGATCTGTCCAAAGA- 70938 Query 131525 ATTGAT-GATTGGGAAAAATTAACCTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTTGC 131583 |||| | ||||| || |||| ||||| || | ||| |||| | | || || Sbjct 70939 CCTGATACAGTGGGAGAATTTAAAAGAAGATGAACAACACTTTATTTCTCACATCCTGGC 70998 Query 131584 ATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGT 131625 ||||| || | |||||||| ||||||| |||||||||||| Sbjct 70999 TTTCTTTGCTGCTAGTGATGGGATTGTTAATGAAAATCTTGT 71040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1182451814457073