Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03]
286,793 sequences; 1,828,271,751 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq1267 138 7e-28
seq5467 122 6e-23
seq1156 104 2e-17
seq629 98.7 7e-16
seq4435 93.3 3e-14
>seq1267
Length=316221
Score = 138 bits (152), Expect = 7e-28
Identities = 160/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597
||||| | ||| ||||| |||||||| ||||| || || || | |||||| | ||
Sbjct 206446 AACACTAGATGAAGAGTAGATTCTTTTTGAATGTTATAGTCTGACAATGTGCGACCATCC 206505
Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657
||||| |||||||| |||||||| || | ||| || ||| | || | |||||||||||
Sbjct 206506 TCCAACTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGAATTCCTTCTTTGTCT 206565
Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716
|||||| | | |||| || | |||||| || | ||||| || | ||||| ||
Sbjct 206566 TGAATTTT-GGCCTTGACATTTTCAATGGTGTCACTAGGCTCCACTTCCAGAGTGATAGT 206624
Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||| ||||||| |||||||||||||||||||||
Sbjct 206625 TTTTCCTGTTAGCGTTTTTACAAAGATCTGCAT 206657
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | ||| | || || || || || || ||| || |||||||| ||||| ||
Sbjct 205746 ACCACCACGCAATCTCAATACTAAGTGGAGGGTCGACTCCTTCTGTATGTTATAATCTGA 205805
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | | || |||| ||| || || |||||||| || | |||||| ||| | ||
Sbjct 205806 CAAGGTTCTTCCATCCTCCAGTTGCTTGCCAGCAAAAATTAACCTCTGCTGGTCTGGAGG 205865
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700
| || ||||| || |||||| |||| ||| ||| ||||| |||| ||| |
Sbjct 205866 GATCCCCTCTTTATCCTGAATTTTAGCCTTCA-CATTTTCAATAGTGTCACTTGGTTCAA 205924
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| ||||||||||| | || || |||||||| |||||
Sbjct 205925 CTTCCAGGGTGATGGTTTTACCTGTCAGAGTCTTAACAAAGATTTGCAT 205973
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
||| || || || || ||||||||| || |||||||| || | || | | | || ||
Sbjct 206220 CACTAAGTGAAGTGTTGACTCTTTTTGAATATTGTAATCAGATAAAGTTCTTCCATCTTC 206279
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
||| || ||||| ||||||||||| | |||||| ||| | || | |||||||||||
Sbjct 206280 CAACTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGAGGGATTCCTTCTTTGTCTTG 206339
Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
|| || ||| |||| || | ||||| || | ||| || || | || || ||||
Sbjct 206340 GATCTTAGCCTTC-ACATTTTCAATTGTGTCACTGGGTTCAACTTCTAGGGTAATGGTTT 206398
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || || | ||||| ||||||||||||||
Sbjct 206399 TGCCGGTAAGGGTTTTCACAAAGATCTGCAT 206429
Score = 98.7 bits (108), Expect = 7e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
||| || || || || ||||||||| || |||||||| || | || | | | || ||
Sbjct 205992 CACTAAGTGAAGTGTTGACTCTTTTTGAATATTGTAATCAGATAAAGTTCTTCCATCTTC 206051
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
||| || ||||| ||||||||||| | ||||| ||| | || | || ||||| ||
Sbjct 206052 CAACTGCTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGAGGGATCCCCTCTTTATCCTG 206111
Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
||||| | | || | || | ||||| |||| ||| || || | ||||| ||||
Sbjct 206112 GATTTT-AGCCTTTACGTTTTCAATAGTGTCACTTGGTTCAACTTCCAGGGTGATAGTTT 206170
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||||||| | || || ||||||||||||||
Sbjct 206171 TACCTGTCAGAGTCTTAACAAAGATCTGCAT 206201
>seq5467
Length=66102
Score = 122 bits (134), Expect = 6e-23
Identities = 175/243 (72%), Gaps = 4/243 (2%)
Strand=Plus/Plus
Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570
|||||| || || |||||||| || | |||| ||| ||||| || ||||| ||
Sbjct 29809 AAAATCTGCATCCCTCCTCTCAATCGCAGAACCAGATGAAGAGTTGATTCCTTTTGGATA 29868
Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630
||||| || || || || ||| | || |||| |||||| || |||||||| | | |||
Sbjct 29869 TTGTAGTCAGAAAGGGTCCGTCCATCCTCCAGTTGTTTACCTGCAAAAATGAGTCTTTGC 29928
Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689
|| ||| | || | |||||||||||| |||||| || || |||| || | || ||
Sbjct 29929 TGGTCTGGTGGAATACCTTCTTTGTCTTGAATTTT-TGCTTTTACATTCTCAATAGTATC 29987
Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||| || || | || || ||||| || |||| ||||| ||||||||||||||
Sbjct 29988 ACTAGGTTCTACTTCCAGAGTAATGGTTTTGCCAGTTAGGGTTTTCACAAAGATCTGCAT 30047
Query 33750 AGT 33752
||
Sbjct 30048 GGT 30050
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618
||||| || || || ||||| || || || ||| | || |||| ||||| || ||||||
Sbjct 29629 TCTTTCTGAATATTATAATCAGAAAGGGTCCGTCCATCCTCCAGCTGTTTACCTGCAAAA 29688
Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678
|||| | ||| || || | || | ||||||||||| || || || || ||||
Sbjct 29689 ATCAGTCTCTGTTGGTCAGGTGGAATGCCTTCTTTGTCTTGGATCTT-TGCTTTTACATT 29747
Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737
|| | ||||| |||| |||||| || | ||||| ||||| || || | || || ||
Sbjct 29748 CTCAATTGTGTCACTTGGTTCCACCTCCAAAGTGATAGTTTTTCCAGTGAGGGTCTTGAC 29807
Query 33738 AAAGATCTGCAT 33749
||| ||||||||
Sbjct 29808 AAAAATCTGCAT 29819
>seq1156
Length=327524
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||||| || | ||| |||||| |||||| || || |||||||| ||
Sbjct 17719 ACCACCACGTAGACGTAGAACAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCTGA 17660
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||||| | | | || || | || ||||| ||||| || || | ||| ||||| | ||
Sbjct 17659 TAGTGTTCTTCCATCTTCTAGCTGCTTTCCTGCAAATATTAATCTCTGTTGATCAGGGGG 17600
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700
| |||||||| || ||||| || | |||| ||| ||||| || | || |
Sbjct 17599 AATTCCTTCTTTATCTTGGATTTT-TGCCTTTACATTCTCAATAGTGTCACTAGGCTCTA 17541
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || || || || ||||| || ||||||||||||||||||||
Sbjct 17540 CTTCTAAGGTAATAGTCTTTCCTGTCAAGGTTTTTACAAAGATCTGCAT 17492
>seq629
Length=499154
Score = 98.7 bits (108), Expect = 7e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || | ||| || | ||| | ||| ||| ||||| ||||||||||| |||
Sbjct 6192 CCACCACGCAGTCTTAAGACAAGATGCAAAGTAGACTCCTTTTGAATGTTGTAATCTGAG 6133
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
||||| ||| | || || | |||||| || ||||| |||| | ||| || || | ||
Sbjct 6132 AGTGTACGTCCATCCTCTAGTTGTTTACCAGCAAAGATCAGTCTCTGTTGGTCAGGTGGG 6073
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| ||||| || || || || |||| || | ||||| |||| |||||
Sbjct 6072 ATGCCTTCCTTGTCTTGGATCTT-TGCTTTTACATTCTCTATTGTGTCACTTGGCTCCAC 6014
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| ||||| || || | || || ||||| || |||||
Sbjct 6013 TTCCAAAGTGATGGTTTTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 5966
>seq4435
Length=89394
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | ||| | | ||||| || || ||| ||| || || || || ||||| ||
Sbjct 36271 CCACCACGCAACCTAAGTACCAAGTGAAGTGTGGACTCCTTCTGAATATTATAATCTGAT 36212
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| ||||| | || ||||| ||||| || ||||||||||| | || |||||| | ||
Sbjct 36211 AAGGTGCGACCATCTTCCAACTGTTTCCCTGCAAAAATCAATCTTTGTTGATCTGGTGGA 36152
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| |||||||| || |||||| | || |||| || | || || || | ||| ||
Sbjct 36151 ATTCCTTCTTTATCTTGAATTTT-GGCTTTTACATTTTCAATAGTATCACTGGGTTCAAC 36093
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | || || ||||| || || | ||||| |||||||| |||||
Sbjct 36092 TTCCAGAGTAATTGTTTTTCCAGTAAGTGTTTTAACAAAGATTTGCAT 36045
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617
|||||| || ||||| ||||| || || || | | || || || |||||||| |||||
Sbjct 36464 CTCTTTCTGGATGTTATAATCTGACAGAGTTCTCCCATCTTCTAACTGTTTTCCTGCAAA 36405
Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677
|| || | ||| || ||| | || | |||||||| || ||||| ||||| |||
Sbjct 36404 GATTAACCTCTGTTGGTCTGGTGGAATTCCTTCTTTATCCTGGATTTTTGCTTTCA-CAT 36346
Query 33678 AGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736
||| ||||| || | ||| || || | || || || || ||||| | ||||| |
Sbjct 36345 TTTCAATAGTGTCACTGGGTTCAACTTCGAGGGTTATAGTCTTGCCTGTAAGAGTTTTGA 36286
Query 33737 CAAAGATCTGCAT 33749
| |||||||||||
Sbjct 36285 CGAAGATCTGCAT 36273
Score = 84.2 bits (92), Expect = 1e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
||||| || || || ||||| || ||||||||||| || || || | | | || |||
Sbjct 36709 ACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCTGACAGGGTTCTTCCATCTTCC 36650
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
||||| || || |||||||| || | || || ||| | || | || || || || |
Sbjct 36649 AATTGCTTCCCAGCAAAAATTAACCTTTGTTGGTCTGGAGGGATTCCCTCCTTATCTTGA 36590
Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719
|| || |||| |||| || | || || || | ||| || |||| ||||| |||||
Sbjct 36589 ATCTTAGCTTTC-ACATTTTCGATTGTATCACTGGGTTCTACCTCAAGGGTGATGGTTTT 36531
Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||||| | || || ||||| || |||||
Sbjct 36530 TCCTGTCAGAGTCTTAACAAAAATTTGCAT 36501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 327555084298560
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