Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= NC_025678.1 Length=32661 Score E Sequences producing significant alignments: (Bits) Value seq70663 102 2e-17 seq73759 86.0 1e-12 >seq70663 Length=227 Score = 102 bits (112), Expect = 2e-17 Identities = 138/188 (73%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 6041 TGGTCAGAAAATACAACTTTTTTAGTGTCAAGTTTCGTGGCGAAAGACCCGTATAAAGCG 6100 ||||||||||| |||| | ||| |||||||| || ||||| ||| |||||| | ||| Sbjct 45 TGGTCAGAAAAGACAA--TCTTTTGTGTCAAGCTTGGTGGC-AAACGCCCGTAGAGGGCG 101 Query 6101 TTCGACAGCAGTTTTGCAATAGACCTCAAAGTTTGGtttttttCCTTGTCTGCCTTTTCC 6160 || ||||||| || || || || | || |||||| ||||| | || || ||| Sbjct 102 TTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGG-TTTTTGCGCGATCGGCGCGCTCC 160 Query 6161 TTGGCGGCTATGTTGAGCTGTACGTAATCCCTCGCCACGCATTTCCACTCCGGAAAAACG 6220 ||||| || ||||| ||||| ||||| || | ||| ||||| ||| || || ||||| Sbjct 161 TTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGG--AAACG 218 Query 6221 GTAGTGCG 6228 || ||||| Sbjct 219 GTGGTGCG 226 >seq73759 Length=212 Score = 86.0 bits (94), Expect = 1e-12 Identities = 115/156 (74%), Gaps = 3/156 (2%) Strand=Plus/Plus Query 6467 TGTTGCCACTTGTGGGCCGCCAGCGCTCTTTCAAACGGATTAAgggggggTCCCCAAGGC 6526 || ||||| | |||| || ||||| | || | || || || ||||| ||||| ||| Sbjct 58 TGCTGCCATGCGCGGGCGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGGACCCCATGGC 117 Query 6527 ATGGGGTGGGTAAGTGCAGAAGCGTACATTCCGCAAATGTCATACACGT-AGAGAGGTTC 6585 ||||||||||| || || || |||||||| ||||||||||| | |||| || | | | Sbjct 118 ATGGGGTGGGTGAGCGCGGAGGCGTACATGCCGCAAATGTCCGAAACGTGAGGGGGCTCT 177 Query 6586 GTTGAGGATGCCAA-TATAGGTGGGATAGCATCTTC 6620 | ||| || |||| ||| | ||| |||||||||| Sbjct 178 CTGGAGTATTCCAAGGATATGAGGG-TAGCATCTTC 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104038070174518